Lineage for d5ferc_ (5fer C:)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2177211Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2177212Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2177213Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2177487Protein Ubiquitin [54238] (8 species)
  7. 2177509Species Cow (Bos taurus) [TaxId:9913] [224919] (34 PDB entries)
  8. 2177570Domain d5ferc_: 5fer C: [317472]
    Other proteins in same PDB: d5ferb_, d5fere_
    automated match to d1ogwa_
    complexed with zn

Details for d5ferc_

PDB Entry: 5fer (more details), 2.34 Å

PDB Description: complex of trim25 ring with ubch5-ub
PDB Compounds: (C:) Ubiquitin-40S ribosomal protein S27a

SCOPe Domain Sequences for d5ferc_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ferc_ d.15.1.1 (C:) Ubiquitin {Cow (Bos taurus) [TaxId: 9913]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

SCOPe Domain Coordinates for d5ferc_:

Click to download the PDB-style file with coordinates for d5ferc_.
(The format of our PDB-style files is described here.)

Timeline for d5ferc_: