Lineage for d5fnvd2 (5fnv D:244-430)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2201108Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. 2201404Superfamily d.79.2: Tubulin C-terminal domain-like [55307] (2 families) (S)
  5. 2201405Family d.79.2.1: Tubulin, C-terminal domain [55308] (4 proteins)
  6. 2201498Protein Tubulin beta-subunit [55313] (2 species)
  7. 2201499Species Cow (Bos taurus) [TaxId:9913] [64322] (11 PDB entries)
    Uniprot P02554
  8. 2201511Domain d5fnvd2: 5fnv D:244-430 [317453]
    Other proteins in same PDB: d5fnva1, d5fnva2, d5fnvb1, d5fnvc1, d5fnvc2, d5fnvd1, d5fnve_, d5fnvf1, d5fnvf2
    automated match to d1sa0b2
    complexed with acp, ca, gdp, gtp, mes, mg, x3h

Details for d5fnvd2

PDB Entry: 5fnv (more details), 2.61 Å

PDB Description: a new complex structure of tubulin with an alpha-beta unsaturated lactone
PDB Compounds: (D:) Tubulin beta chain

SCOPe Domain Sequences for d5fnvd2:

Sequence, based on SEQRES records: (download)

>d5fnvd2 d.79.2.1 (D:244-430) Tubulin beta-subunit {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfapltsrgsqqyraltvpeltqqmfdaknmmaac
dprhgryltvaavfrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkm
satfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyq
qyqdata

Sequence, based on observed residues (ATOM records): (download)

>d5fnvd2 d.79.2.1 (D:244-430) Tubulin beta-subunit {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfaplltvpeltqqmfdaknmmaacdprhgryltv
aavfrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkmsatfignsta
iqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyqqyqdata

SCOPe Domain Coordinates for d5fnvd2:

Click to download the PDB-style file with coordinates for d5fnvd2.
(The format of our PDB-style files is described here.)

Timeline for d5fnvd2: