SCOPe 2.08: Domain d5hjpa1: 5hjp A:299-528

Lineage for d5hjpa1 (5hjp A:299-528)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein automated matches [190059] (14 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187214] (171 PDB entries)

8. Domain d5hjpa1: 5hjp A:299-528 [316727]
   Other proteins in same PDB: d5hjpa2, d5hjpb1, d5hjpb2, d5hjpc2, d5hjpd1, d5hjpd2
   automated match to d4j5wd_
   complexed with 668, peg

Details for d5hjpa1

PDB Entry: 5hjp, 2.6 Å

PDB Description: identification of lxrbeta selective agonists for the treatment of alzheimer's disease

PDB Compounds: (A:) Retinoic acid receptor RXR-beta

SCOPe Domain Sequences for d5hjpa1:

Sequence, based on SEQRES records:

>d5hjpa1 a.123.1.1 (A:299-528) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mpvdrileaelaveqksdqgvegpggtggsgsspndpvtnicqaadkqlftlvewakrip
hfsslplddqvillragwnelliasfshrsidvrdgillatglhvhrnsahsagvgaifd
rvltelvskmrdmrmdktelgclraiilfnpdakglsnpsevevlrekvyasletyckqk
ypeqqgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemlea

Sequence, based on observed residues (ATOM records):

>d5hjpa1 a.123.1.1 (A:299-528) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mpvdrileaelavevtnicqaadkqlftlvewakriphfsslplddqvillragwnelli
asfshrsidvrdgillatglhvhrnsahsagvgaifdrvltelvskmrdmrmdktelgcl
raiilfnpdakglsnpsevevlrekvyasletyckqkypeqqgrfaklllrlpalrsigl
kclehlfffkligdtpidtflmemlea

Timeline for d5hjpa1:

• d5hjpa1 first appeared in SCOPe 2.06
  
• d5hjpa1 appears in SCOPe 2.07