Lineage for d4yaga_ (4yag A:)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2102557Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2102558Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2106799Family c.2.1.0: automated matches [191313] (1 protein)
    not a true family
  6. 2106800Protein automated matches [190069] (239 species)
    not a true protein
  7. 2108778Species Sphingobium sp. [TaxId:627192] [311972] (5 PDB entries)
  8. 2108779Domain d4yaga_: 4yag A: [316449]
    automated match to d4y9da_
    complexed with nai

Details for d4yaga_

PDB Entry: 4yag (more details), 1.5 Å

PDB Description: crystal structure of ligl in complex with nadh from sphingobium sp. strain syk-6
PDB Compounds: (A:) C alpha-dehydrogenase

SCOPe Domain Sequences for d4yaga_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4yaga_ c.2.1.0 (A:) automated matches {Sphingobium sp. [TaxId: 627192]}
mdiagttafitggasgigfgiaqrllangarlvladirqdhldearqffeerqqgrnvht
irldvsdraqmaeaareceavmggpdilinnagidpsgpfkdatyqdwdyglainlmgpi
ngimaftpgmrargrgghivntaslagltpmpsfmaiyatakaavitltetirdsmaedn
igvtvlmpgpiksrihesgqnrperfragsglaeteqqlakrvvadnwmeptevgdmivd
aivhnklyvsthgnwretcearfqalldsmp

SCOPe Domain Coordinates for d4yaga_:

Click to download the PDB-style file with coordinates for d4yaga_.
(The format of our PDB-style files is described here.)

Timeline for d4yaga_: