SCOPe 2.02: Domain d1dnpb2: 1dnp B:1-200

Lineage for d1dnpb2 (1dnp B:1-200)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.28: Cryptochrome/photolyase, N-terminal domain [52424] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like

4. Superfamily c.28.1: Cryptochrome/photolyase, N-terminal domain [52425] (1 family)

5. Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain [52426] (2 proteins)

6. Protein DNA photolyase [52427] (3 species)
   binds a light-harvesting cofactor

7. Species Escherichia coli [TaxId:562] [52428] (1 PDB entry)
   cofactor is MHTF

8. Domain d1dnpb2: 1dnp B:1-200 [31631]
   Other proteins in same PDB: d1dnpa1, d1dnpb1
   complexed with fad, mhf

Details for d1dnpb2

PDB Entry: 1dnp, 2.3 Å

PDB Description: structure of deoxyribodipyrimidine photolyase

PDB Compounds: (B:) DNA photolyase

SCOPe Domain Sequences for d1dnpb2:

Sequence; same for both SEQRES and ATOM records:

>d1dnpb2 c.28.1.1 (B:1-200) DNA photolyase {Escherichia coli [TaxId: 562]}
tthlvwfrqdlrlhdnlalaaacrnssarvlalyiatprqwathnmsprqaelinaqlng
lqialaekgipllfrevddfvasveivkqvcaensvthlfynyqyevnerardveveral
rnvvcegfddsvilppgavmtgnhemykvftpfknawlkrlregmpecvaapkvrssgsi
epspsitlnyprqsfdtahf

Timeline for d1dnpb2:

• d1dnpb2 first appeared (with stable ids) in SCOP 1.55
  
• d1dnpb2 appears in SCOPe 2.01
  
• d1dnpb2 appears in SCOPe 2.03
  
• d1dnpb2 appears in the current release, SCOPe 2.08