Lineage for d1gpmd1 (1gpm D:208-404)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2105373Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
    core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
  4. 2106293Superfamily c.26.2: Adenine nucleotide alpha hydrolases-like [52402] (7 families) (S)
    share similar mode of ligand (Adenosine group) binding
    can be subdivided into two group with closer relationships within each group than between the groups; the first three families form one group whereas the last two families form the other group
  5. 2106294Family c.26.2.1: N-type ATP pyrophosphatases [52403] (9 protein domains)
  6. 2106362Protein GMP synthetase, central domain [52404] (2 species)
  7. 2106363Species Escherichia coli [TaxId:562] [52405] (1 PDB entry)
  8. 2106367Domain d1gpmd1: 1gpm D:208-404 [31611]
    Other proteins in same PDB: d1gpma2, d1gpma3, d1gpmb2, d1gpmb3, d1gpmc2, d1gpmc3, d1gpmd2, d1gpmd3
    complexed with amp, cit, mg, po4, pop

Details for d1gpmd1

PDB Entry: 1gpm (more details), 2.2 Å

PDB Description: escherichia coli gmp synthetase complexed with amp and pyrophosphate
PDB Compounds: (D:) gmp synthetase

SCOPe Domain Sequences for d1gpmd1:

Sequence, based on SEQRES records: (download)

>d1gpmd1 c.26.2.1 (D:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]}
wtpakiiddavarireqvgddkvilglsggvdssvtamllhraigknltcvfvdngllrl
neaeqvldmfgdhfglnivhvpaedrflsalagendpeakrkiigrvfvevfdeealkle
dvkwlaqgtiypdviesaasatgkahvikshhnvgglpkemkmglveplkelfkdevrki
glelglpydmlyrhpfp

Sequence, based on observed residues (ATOM records): (download)

>d1gpmd1 c.26.2.1 (D:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]}
wtpakiiddavarireqvgddkvilglsggvdssvtamllhraigknltcvfvdngllrl
neaeqvldmfgdhfglnivhvpaedrflsalagendpeakrkiigrvfvevfdeealkle
dvkwlaqgtiypdviemkmglveplkelfkdevrkiglelglpydmlyrhpfp

SCOPe Domain Coordinates for d1gpmd1:

Click to download the PDB-style file with coordinates for d1gpmd1.
(The format of our PDB-style files is described here.)

Timeline for d1gpmd1: