Lineage for d5dbuf_ (5dbu F:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2420459Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2421872Family c.1.10.0: automated matches [191319] (1 protein)
    not a true family
  6. 2421873Protein automated matches [190115] (76 species)
    not a true protein
  7. 2422411Species Streptococcus suis [TaxId:423211] [315210] (2 PDB entries)
  8. 2422429Domain d5dbuf_: 5dbu F: [315217]
    automated match to d3ndoa_

Details for d5dbuf_

PDB Entry: 5dbu (more details), 2.8 Å

PDB Description: crystal structure of 2-deoxyribose-5-phosphate aldolase (1-220) from streptococcus suis
PDB Compounds: (F:) deoxyribose-phosphate aldolase

SCOPe Domain Sequences for d5dbuf_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5dbuf_ c.1.10.0 (F:) automated matches {Streptococcus suis [TaxId: 423211]}
klnkyidhtilkpettqeqvekilaeakeydfasvcvnptwvalaaeslkdsdvkvctvi
gfplgantpavkafetkdaisngadeidmvinigalktgnydlvledikavvaasgdklv
kviieaclltddekvkacqlsqeagadyvktstgfstggatvadvalmrktvgpdmgvka
sggarsyedaiafieagasrigassgvaim

SCOPe Domain Coordinates for d5dbuf_:

Click to download the PDB-style file with coordinates for d5dbuf_.
(The format of our PDB-style files is described here.)

Timeline for d5dbuf_: