SCOPe 2.07: Domain d5h8fa_: 5h8f A:

Lineage for d5h8fa_ (5h8f A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.0: automated matches [191309] (1 protein)
   not a true family

6. Protein automated matches [190039] (158 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [193730] (34 PDB entries)

8. Domain d5h8fa_: 5h8f A: [314838]
   Other proteins in same PDB: d5h8fb_
   automated match to d4nf8b_
   complexed with glu, gly, gol

Details for d5h8fa_

PDB Entry: 5h8f, 1.81 Å

PDB Description: structure of the apo human glun1/glun2a lbd

PDB Compounds: (A:) Glutamate receptor ionotropic, NMDA 2A

SCOPe Domain Sequences for d5h8fa_:

Sequence, based on SEQRES records:

>d5h8fa_ c.94.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nhlsivtleeapfvivedidpltetcvrntvpcrkfvkinnstnegmnvkkcckgfcidi
lkklsrtvkftydlylvtngkhgkkvnnvwngmigevvyqravmavgsltineersevvd
fsvpfvetgisvmvsrgtqvtglsdkkfqrphdysppfrfgtvpngsternirnnypymh
qymtkfnqkgvedalvslktgkldafiydaavlnykagrdegcklvtigsgyifattgyg
ialqkgspwkrqidlallqfvgdgemeeletlwltgic

Sequence, based on observed residues (ATOM records):

>d5h8fa_ c.94.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nhlsivtleeapfvivedietcvrntvpcrkfvkinnstnegmnvkkcckgfcidilkkl
srtvkftydlylvtngkhgkkvnnvwngmigevvyqravmavgsltineersevvdfsvp
fvetgisvmvsrgtqvtglsdkkfqrphdysppfrfgtvpngsternirnnypymhqymt
kfnqkgvedalvslktgkldafiydaavlnykagrdegcklvtigsgyifattgygialq
kgspwkrqidlallqfvgdgemeeletlwltgic

Timeline for d5h8fa_:

• d5h8fa_ first appeared in SCOPe 2.06
  
• d5h8fa_ appears in the current release, SCOPe 2.08