Lineage for d5h8fb_ (5h8f B:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2913607Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2913608Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2913609Family c.94.1.1: Phosphate binding protein-like [53851] (45 proteins)
    has additional insertions and/or extensions that are not grouped together
  6. 2914403Protein N-methyl-D-aspartate receptor subunit 1 [89787] (3 species)
  7. 2914404Species Human (Homo sapiens) [TaxId:9606] [314718] (10 PDB entries)
  8. 2914405Domain d5h8fb_: 5h8f B: [314808]
    Other proteins in same PDB: d5h8fa_
    automated match to d1pb7a_
    complexed with glu, gly, gol

Details for d5h8fb_

PDB Entry: 5h8f (more details), 1.81 Å

PDB Description: structure of the apo human glun1/glun2a lbd
PDB Compounds: (B:) Glutamate receptor ionotropic, NMDA 1

SCOPe Domain Sequences for d5h8fb_:

Sequence, based on SEQRES records: (download)

>d5h8fb_ c.94.1.1 (B:) N-methyl-D-aspartate receptor subunit 1 {Human (Homo sapiens) [TaxId: 9606]}
rlkivtihqepfvyvkptlsdgtckeeftvngdpvkkvictgpndtspgsprhtvpqccy
gfcidlliklartmnftyevhlvadgkfgtqervnnsnkkewngmmgellsgqadmivap
ltinneraqyiefskpfkyqgltilvkkgtritgindprlrnpsdkfiyatvkqssvdiy
frrqvelstmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvttgel
ffrsgfgigmrkdspwkqnvslsilkshengfmedldktwvryqec

Sequence, based on observed residues (ATOM records): (download)

>d5h8fb_ c.94.1.1 (B:) N-methyl-D-aspartate receptor subunit 1 {Human (Homo sapiens) [TaxId: 9606]}
rlkivtihqepfvyvkptlsdgtckeeftvngdpvkkvictgpndtspgsprhtvpqccy
gfcidlliklartmnftyevhlvadgkfgtqervnkkewngmmgellsgqadmivaplti
nneraqyiefskpfkyqgltilvkkgtritgindprlrnpsdkfiyatvkqssvdiyfrr
qvelstmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvttgelffr
sgfgigmrkdspwkqnvslsilkshengfmedldktwvryqec

SCOPe Domain Coordinates for d5h8fb_:

Click to download the PDB-style file with coordinates for d5h8fb_.
(The format of our PDB-style files is described here.)

Timeline for d5h8fb_: