Lineage for d5f7nd1 (5f7n D:3-114)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2344610Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 protein domains)
  6. 2347168Protein automated matches [190119] (19 species)
    not a true protein
  7. 2348290Species Vicugna pacos [TaxId:30538] [189756] (40 PDB entries)
  8. 2348327Domain d5f7nd1: 5f7n D:3-114 [314172]
    Other proteins in same PDB: d5f7nc2, d5f7nd2
    automated match to d4ldeb_
    complexed with a2g, fuc, gal, nag

Details for d5f7nd1

PDB Entry: 5f7n (more details), 2.28 Å

PDB Description: blood group antigen binding adhesin baba of helicobacter pylori strain 17875 in complex with blood group a lewis b pentasaccharide
PDB Compounds: (D:) Nanobody Nb-ER19

SCOPe Domain Sequences for d5f7nd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5f7nd1 b.1.1.1 (D:3-114) automated matches {Vicugna pacos [TaxId: 30538]}

SCOPe Domain Coordinates for d5f7nd1:

Click to download the PDB-style file with coordinates for d5f7nd1.
(The format of our PDB-style files is described here.)

Timeline for d5f7nd1:

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