Lineage for d1f8yb_ (1f8y B:)

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 390873Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. 391608Superfamily c.23.14: N-deoxyribosyltransferase [52309] (1 family) (S)
  5. 391609Family c.23.14.1: N-deoxyribosyltransferase [52310] (2 proteins)
  6. 391610Protein Nucleoside 2-deoxyribosyltransferase [52311] (1 species)
    class II N-deoxyribosyltransferase
  7. 391611Species Lactobacillus leichmannii [TaxId:28039] [52312] (2 PDB entries)
  8. 391613Domain d1f8yb_: 1f8y B: [31396]
    complexed with 5-methyl-2'-deoxypseudouridine
    complexed with 5md

Details for d1f8yb_

PDB Entry: 1f8y (more details), 2.4 Å

PDB Description: crystal structure analysis of nucleoside 2-deoxyribosyltransferase complexed with 5-methyl-2'-deoxypseudouridine

SCOP Domain Sequences for d1f8yb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1f8yb_ c.23.14.1 (B:) Nucleoside 2-deoxyribosyltransferase {Lactobacillus leichmannii}
pkktiyfgagwftdrqnkaykeamealkenptidlensyvpldnqykgirvdehpeylhd
kvwatatynndlngiktndimlgvyipdeedvglgmelgyalsqgkyvllvipdedygkp
inlmswgvsdnvikmsqlkdfnfnkprfdfyegavy

SCOP Domain Coordinates for d1f8yb_:

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Timeline for d1f8yb_: