Class b: All beta proteins [48724] (180 folds) |
Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies) one turn of helix is made by two pairs of antiparallel strands linked with short turns has appearance of a sandwich of distinct architecture and jelly-roll topology |
Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold |
Family b.82.2.14: Jumonji domain / Histone demethylase core [254153] (7 proteins) Jumonji domain; Pfam PF02375 (JmjN) and Pfam PF02373 (JmjC); relationship to FIH1 (b.82.2.6) described in PubMed 16983801 Pfam PF02375 (JmjN) and Pfam PF02373 (JmjC); relationship to FIH1 (b.82.2.6) described in PubMed 16983801; some members include C-terminal helical subdomain (Pfam PF17811) |
Protein JMJD2A core [254342] (1 species) |
Species Human (Homo sapiens) [TaxId:9606] [254775] (57 PDB entries) |
Domain d5f2sa_: 5f2s A: [313958] automated match to d4v2wb_ complexed with 5tz, cl, dms, edo, zn |
PDB Entry: 5f2s (more details), 2.08 Å
SCOPe Domain Sequences for d5f2sa_:
Sequence, based on SEQRES records: (download)
>d5f2sa_ b.82.2.14 (A:) JMJD2A core {Human (Homo sapiens) [TaxId: 9606]} npsarimtfyptmeefrnfsryiayiesqgahraglakvvppkewkprasyddiddlvip apiqqlvtgqsglftqyniqkkamtvrefrkiansdkyctprysefeelerkywknltfn ppiygadvngtlyekhvdewnigrlrtildlvekesgitiegvntpylyfgmwktsfawh tedmdlysinylhfgepkswysvppehgkrlerlakgffpgsaqsceaflrhkmtlispl mlkkygipfdkvtqeagefmitfpygyhagfnhgfncaestnfatrrwieygkqavlcsc rkdmvkismdvfvrkfqperyklwkagkdntvidhtlptpeaaefl
>d5f2sa_ b.82.2.14 (A:) JMJD2A core {Human (Homo sapiens) [TaxId: 9606]} npsarimtfyptmeefrnfsryiayiesqgahraglakvvppkewkprasyddiddlvip apiqqlvtgqsglftqyniqkkamtvrefrkiansdkyctprysefeelerkywknltfn ppiygadvngtlyekhvdewnigrlrtildlvekesgitiegvntpylyfgmwktsfawh tedmdlysinylhfgepkswysvppehgkrlerlakgffpgsaqsceaflrhkmtlispl mlkkygipfdkvtqeagefmitfpygyhagfnhgfncaestnfatrrwieygkqavlcsc vkismdvfvrkfqperyklwkagkdntvidhtlptpeaaefl
Timeline for d5f2sa_: