Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. Family b.82.2.10: AlkB-like [141628] (3 proteins)
    automatically mapped to Pfam PF13532
  6. Protein automated matches [191077] (2 species)
    not a true protein
  7. Species Escherichia coli [TaxId:562] [313153] (4 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 4nid:
    • Domain d4nida_: 4nid A: [257161]
      automated match to d3khca_
      protein/DNA complex; protein/RNA complex; complexed with akg, mn
  2. Domain(s) for 4nig:
    • Domain d4niga_: 4nig A: [257162]
      automated match to d3khca_
      protein/DNA complex; protein/RNA complex; complexed with akg, mn; mutant
  3. Domain(s) for 4nih:
    • Domain d4niha_: 4nih A: [257163]
      automated match to d3khca_
      protein/DNA complex; protein/RNA complex; complexed with akg, gol, mn; mutant
  4. Domain(s) for 4nii:
    • Domain d4niia_: 4nii A: [257164]
      automated match to d3khca_
      protein/DNA complex; protein/RNA complex; complexed with akg, mn; mutant

More info for Species Escherichia coli [TaxId:562] from b.82.2.10 automated matches

Timeline for Species Escherichia coli [TaxId:562] from b.82.2.10 automated matches: