Lineage for Species: Helicobacter pylori [TaxId: 85962]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2420459Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2421872Family c.1.10.0: automated matches [191319] (1 protein)
    not a true family
  6. 2421873Protein automated matches [190115] (80 species)
    not a true protein
  7. 2422163Species Helicobacter pylori [TaxId:85962] [312431] (15 PDB entries)

PDB entries in Species: Helicobacter pylori [TaxId: 85962]:

  1. Domain(s) for 4z1a:
    1. 2422168Domain d4z1aa_: 4z1a A: [312432]
      automated match to d3e0ia_
    2. 2422169Domain d4z1ab_: 4z1a B: [312433]
      automated match to d3e0ia_
  2. Domain(s) for 4z1b:
    1. 2422170Domain d4z1ba_: 4z1b A: [313054]
      automated match to d1lrob_
      mutant
    2. 2422171Domain d4z1bb_: 4z1b B: [312485]
      automated match to d1lrob_
      mutant
  3. Domain(s) for 4z1c:
    1. 2422166Domain d4z1ca_: 4z1c A: [312462]
      automated match to d3e0ia_
      complexed with cd
    2. 2422167Domain d4z1cb_: 4z1c B: [313111]
      automated match to d3e0ia_
      complexed with cd
  4. Domain(s) for 4z1d:
    1. 2422164Domain d4z1da_: 4z1d A: [313043]
      automated match to d3e0ia_
      complexed with pep, zn
    2. 2422165Domain d4z1db_: 4z1d B: [313091]
      automated match to d3e0ia_
      complexed with pep, zn
  5. Domain(s) for 5uck:
    1. 3050861Domain d5uckb_: 5uck B: [350923]
      automated match to d3c4ua_
      complexed with 13p, g3h, na, zn
    2. 3050902Domain d5ucka_: 5uck A: [350964]
      automated match to d3c4ua_
      complexed with 13p, g3h, na, zn
  6. Domain(s) for 5ucn:
    1. 3050853Domain d5ucnb_: 5ucn B: [350915]
      automated match to d3c4ua_
      complexed with 13p, na, zn
    2. 3050932Domain d5ucna_: 5ucn A: [350994]
      automated match to d3c4ua_
      complexed with 13p, na, zn
  7. Domain(s) for 5ucp:
    1. 3050870Domain d5ucpa_: 5ucp A: [350932]
      automated match to d3c4ua_
      complexed with 13p, g3h, na, p6f, zn
    2. 3050938Domain d5ucpb_: 5ucp B: [351000]
      automated match to d3c4ua_
      complexed with 13p, g3h, na, p6f, zn
  8. Domain(s) for 5ucs:
    1. 3050830Domain d5ucsa_: 5ucs A: [350892]
      automated match to d3c4ua_
      complexed with na, zn
    2. 3050917Domain d5ucsb_: 5ucs B: [350979]
      automated match to d3c4ua_
      complexed with na, zn
  9. Domain(s) for 5ucz:
    1. 3050851Domain d5uczb_: 5ucz B: [350913]
      automated match to d3c4ua_
      complexed with 13p, na, zn
    2. 3050985Domain d5ucza_: 5ucz A: [351047]
      automated match to d3c4ua_
      complexed with 13p, na, zn
  10. Domain(s) for 5ud0:
    1. 3050934Domain d5ud0b_: 5ud0 B: [350996]
      automated match to d3c4ua_
      complexed with 13p, ca, g3h, na, zn
    2. 3050954Domain d5ud0a_: 5ud0 A: [351016]
      automated match to d3c4ua_
      complexed with 13p, ca, g3h, na, zn
  11. Domain(s) for 5ud1:
    1. 3050862Domain d5ud1a_: 5ud1 A: [350924]
      automated match to d3c4ua_
      complexed with na, zn
    2. 3050883Domain d5ud1b_: 5ud1 B: [350945]
      automated match to d3c4ua_
      complexed with na, zn
  12. Domain(s) for 5ud2:
    1. 3050848Domain d5ud2b_: 5ud2 B: [350910]
      automated match to d3c4ua_
      complexed with 13p, na, zn
    2. 3050966Domain d5ud2a_: 5ud2 A: [351028]
      automated match to d3c4ua_
      complexed with 13p, na, zn
  13. Domain(s) for 5ud3:
    1. 3050893Domain d5ud3b_: 5ud3 B: [350955]
      automated match to d3c4ua_
      complexed with na, p6f, zn
    2. 3050982Domain d5ud3a_: 5ud3 A: [351044]
      automated match to d3c4ua_
      complexed with na, p6f, zn
  14. Domain(s) for 5ud4:
    1. 3050847Domain d5ud4a_: 5ud4 A: [350909]
      automated match to d3c4ua_
      complexed with na, p6t, zn
    2. 3050860Domain d5ud4b_: 5ud4 B: [350922]
      automated match to d3c4ua_
      complexed with na, p6t, zn
  15. Domain(s) for 5vjf:
    1. 3051021Domain d5vjfb_: 5vjf B: [351083]
      automated match to d3c4ua_
      complexed with 13p, ca, gol, na, zn
    2. 3051023Domain d5vjfa_: 5vjf A: [351085]
      automated match to d3c4ua_
      complexed with 13p, ca, gol, na, zn

More info for Species Helicobacter pylori [TaxId:85962] from c.1.10.0 automated matches

Timeline for Species Helicobacter pylori [TaxId:85962] from c.1.10.0 automated matches: