Lineage for d4ykmb_ (4ykm B:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2395396Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. 2395397Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior
  5. 2395948Family b.60.1.2: Fatty acid binding protein-like [50847] (18 proteins)
    ten-stranded meander beta-sheet folded upon itself
    relates to the common fold by opening the barrel and insertion of beta-hairpin
  6. 2396009Protein Cellular retinoic-acid-binding protein (CRABP) [50861] (2 species)
  7. 2396016Species Human (Homo sapiens), CRABP-II [TaxId:9606] [50862] (71 PDB entries)
  8. 2396042Domain d4ykmb_: 4ykm B: [312047]
    automated match to d4m7ma_
    complexed with ret; mutant

Details for d4ykmb_

PDB Entry: 4ykm (more details), 1.58 Å

PDB Description: crystal structure of the r111k:y134f:t54v:r132q:p39q:r59y:a32w:f3q mutant of human cellular retinoic acid binding protein ii with retinal at 1.58 angstrom resolution
PDB Compounds: (B:) Cellular retinoic acid-binding protein 2

SCOPe Domain Sequences for d4ykmb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4ykmb_ b.60.1.2 (B:) Cellular retinoic-acid-binding protein (CRABP) {Human (Homo sapiens), CRABP-II [TaxId: 9606]}
pnqsgnwkiirsenfeellkvlgvnvmlrkiwvaaaskqaveikqegdtfyikvsttvyt
teinfkvgeefeeqtvdgrpckslvkwesenkmvceqkllkgegpktswtkeltndgeli
ltmtaddvvctqvfvre

SCOPe Domain Coordinates for d4ykmb_:

Click to download the PDB-style file with coordinates for d4ykmb_.
(The format of our PDB-style files is described here.)

Timeline for d4ykmb_: