Lineage for Species: CPMV (Cowpea mosaic virus) [TaxId: 12264]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2075626Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2075967Family b.121.4.2: Comoviridae-like VP [88636] (3 protein domains)
    duplication: mature coat protein consists of three similar domains that can be in a single chain or in two separate chains
  6. 2075991Protein automated matches [310893] (1 species)
    not a true protein
  7. 2075992Species CPMV (Cowpea mosaic virus) [TaxId:12264] [311486] (2 PDB entries)

PDB entries in Species: CPMV (Cowpea mosaic virus) [TaxId: 12264]:

  1. Domain(s) for 5a33:
    1. 2075993Domain d5a33b1: 5a33 B:1-182 [310135]
      automated match to d1ny721
    2. 2075994Domain d5a33b2: 5a33 B:183-367 [310136]
      automated match to d1ny722
    3. 2289862Domain d5a33a_: 5a33 A: [333163]
      automated match to d5fmos_
  2. Domain(s) for 5fmo:
    1. 2272033Domain d5fmos_: 5fmo S: [315334]
      automated match to d1ny711
    2. 2272037Domain d5fmol1: 5fmo L:1-182 [315338]
      automated match to d1ny721
    3. 2272038Domain d5fmol2: 5fmo L:183-370 [315339]
      automated match to d1ny722

More info for Species CPMV (Cowpea mosaic virus) [TaxId:12264] from b.121.4.2 automated matches

Timeline for Species CPMV (Cowpea mosaic virus) [TaxId:12264] from b.121.4.2 automated matches:

  • Species CPMV (Cowpea mosaic virus) [TaxId:12264] from b.121.4.2 automated matches is new in SCOPe 2.06-stable