Lineage for Species: Sinorhizobium fredii [TaxId: 380]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1982196Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) (S)
    contains a small beta-sheet (wing)
  5. 1983660Family a.4.5.0: automated matches [191329] (1 protein)
    not a true family
  6. 1983661Protein automated matches [190154] (68 species)
    not a true protein
  7. 1983964Species Sinorhizobium fredii [TaxId:380] [311408] (2 PDB entries)

PDB entries in Species: Sinorhizobium fredii [TaxId: 380]:

  1. Domain(s) for 4omy:
    1. 1983965Domain d4omya_: 4omy A: [307913]
      automated match to d3jthb_
      protein/DNA complex
    2. 1983966Domain d4omyb_: 4omy B: [307914]
      automated match to d3jthb_
      protein/DNA complex
    3. 1983967Domain d4omyc_: 4omy C: [307915]
      automated match to d3jthb_
      protein/DNA complex
    4. 1983968Domain d4omyd_: 4omy D: [307916]
      automated match to d3jthb_
      protein/DNA complex
  2. Domain(s) for 4omz:
    1. 1983969Domain d4omza_: 4omz A: [307917]
      automated match to d3jthb_
      complexed with po4
    2. 1983970Domain d4omzb_: 4omz B: [307918]
      automated match to d3jthb_
      complexed with po4
    3. 1983971Domain d4omzc_: 4omz C: [307919]
      automated match to d3jthb_
      complexed with po4
    4. 1983972Domain d4omzd_: 4omz D: [307920]
      automated match to d3jthb_
      complexed with po4
    5. 1983973Domain d4omze_: 4omz E: [307921]
      automated match to d3jthb_
      complexed with po4
    6. 1983974Domain d4omzf_: 4omz F: [307922]
      automated match to d3jthb_
      complexed with po4
    7. 1983975Domain d4omzg_: 4omz G: [307923]
      automated match to d3jthb_
      complexed with po4
    8. 1983976Domain d4omzh_: 4omz H: [307924]
      automated match to d3jthb_
      complexed with po4

More info for Species Sinorhizobium fredii [TaxId:380] from a.4.5.0 automated matches

Timeline for Species Sinorhizobium fredii [TaxId:380] from a.4.5.0 automated matches:

  • Species Sinorhizobium fredii [TaxId:380] from a.4.5.0 automated matches is new in SCOPe 2.06-stable