Lineage for Species: SARS coronavirus [TaxId: 227859]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2154577Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2154578Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2155396Family d.3.1.23: Papain-like viral protease catalytic domain [310648] (2 protein domains)
    C-terminal part of Pfam PF08715
  6. 2155410Protein automated matches [310868] (5 species)
    not a true protein
  7. 2155416Species SARS coronavirus [TaxId:227859] [311282] (4 PDB entries)

PDB entries in Species: SARS coronavirus [TaxId: 227859]:

  1. Domain(s) for 3e9s:
  2. Domain(s) for 4m0w:
  3. Domain(s) for 4mm3:
  4. Domain(s) for 5tl7:
    1. 2290580Domain d5tl7b2: 5tl7 B:63-316 [333881]
      Other proteins in same PDB: d5tl7a_, d5tl7b1, d5tl7b3, d5tl7c_, d5tl7d1
      automated match to d2fe8a2
      complexed with zn
    2. 2290591Domain d5tl7d2: 5tl7 D:63-316 [333892]
      Other proteins in same PDB: d5tl7a_, d5tl7b1, d5tl7b3, d5tl7c_, d5tl7d1
      automated match to d2fe8a2
      complexed with zn

More info for Species SARS coronavirus [TaxId:227859] from d.3.1.23 automated matches

Timeline for Species SARS coronavirus [TaxId:227859] from d.3.1.23 automated matches:

  • Species SARS coronavirus [TaxId:227859] from d.3.1.23 automated matches is new in SCOPe 2.06-stable