SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Salmonella phage SETP3 [TaxId: 424944]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2121131Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. 2121132Superfamily c.52.1: Restriction endonuclease-like [52980] (36 families) (S)
  5. 2121651Family c.52.1.35: Virus-type replication-repair nuclease (VRR-Nuc) [310663] (3 protein domains)
    Pfam PF08774
  6. 2121663Protein stNUC [310832] (1 species)
  7. 2121664Species Salmonella phage SETP3 [TaxId:424944] [311101] (1 PDB entry)

PDB entry in Species: Salmonella phage SETP3 [TaxId: 424944]:

More info for Species Salmonella phage SETP3 [TaxId:424944] from c.52.1.35 stNUC

Timeline for Species Salmonella phage SETP3 [TaxId:424944] from c.52.1.35 stNUC:

  • Species Salmonella phage SETP3 [TaxId:424944] from c.52.1.35 stNUC is new in SCOPe 2.06-stable