Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2070014Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2070786Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. 2070888Family b.82.2.5: TauD/TfdA-like [75038] (5 protein domains)
    automatically mapped to Pfam PF02668
  6. 2070889Protein Gamma-butyrobetaine dioxygenase (BBOX1) catalytic domain [310813] (1 species)
  7. 2070890Species Human (Homo sapiens) [TaxId:9606] [311079] (4 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 3ms5:
  2. Domain(s) for 3o2g:
  3. Domain(s) for 4c8r:
    1. 2070894Domain d4c8ra2: 4c8r A:96-384 [307095]
      Other proteins in same PDB: d4c8ra1, d4c8rb1, d4c8rc1, d4c8rd1, d4c8re1, d4c8rf1
      automated match to d3ms5a2
      complexed with 6yt, edo, ni, zn
    2. 2070895Domain d4c8rb2: 4c8r B:96-384 [307097]
      Other proteins in same PDB: d4c8ra1, d4c8rb1, d4c8rc1, d4c8rd1, d4c8re1, d4c8rf1
      automated match to d3ms5a2
      complexed with 6yt, edo, ni, zn
    3. 2070896Domain d4c8rc2: 4c8r C:96-384 [307099]
      Other proteins in same PDB: d4c8ra1, d4c8rb1, d4c8rc1, d4c8rd1, d4c8re1, d4c8rf1
      automated match to d3ms5a2
      complexed with 6yt, edo, ni, zn
    4. 2070897Domain d4c8rd2: 4c8r D:96-384 [307101]
      Other proteins in same PDB: d4c8ra1, d4c8rb1, d4c8rc1, d4c8rd1, d4c8re1, d4c8rf1
      automated match to d3ms5a2
      complexed with 6yt, edo, ni, zn
    5. 2070898Domain d4c8re2: 4c8r E:96-384 [307103]
      Other proteins in same PDB: d4c8ra1, d4c8rb1, d4c8rc1, d4c8rd1, d4c8re1, d4c8rf1
      automated match to d3ms5a2
      complexed with 6yt, edo, ni, zn
    6. 2070899Domain d4c8rf2: 4c8r F:96-384 [307105]
      Other proteins in same PDB: d4c8ra1, d4c8rb1, d4c8rc1, d4c8rd1, d4c8re1, d4c8rf1
      automated match to d3ms5a2
      complexed with 6yt, edo, ni, zn
  4. Domain(s) for 4cwd:

More info for Species Human (Homo sapiens) [TaxId:9606] from b.82.2.5 Gamma-butyrobetaine dioxygenase (BBOX1) catalytic domain

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.82.2.5 Gamma-butyrobetaine dioxygenase (BBOX1) catalytic domain:

  • Species Human (Homo sapiens) [TaxId:9606] from b.82.2.5 Gamma-butyrobetaine dioxygenase (BBOX1) catalytic domain is new in SCOPe 2.06-stable