Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2399102Fold b.69: 7-bladed beta-propeller [50964] (15 superfamilies)
    consists of seven 4-stranded beta-sheet motifs; meander
  4. 2399860Superfamily b.69.15: Retinal pigment epithelial membrane protein-like [310595] (1 family) (S)
    Pfam PF03055
  5. 2399861Family b.69.15.1: RPE65-like [310643] (2 protein domains)
  6. 2399893Protein automated matches [310886] (2 species)
    not a true protein

Species:

  1. 2399894Cow (Bos taurus) [TaxId:9913] [311375] (6 PDB entries)
    1. Domains for 4f2z:
      1. 2399903Domain d4f2za_: 4f2z A: [307341]
        automated match to d3fsna_
        complexed with fe2
      2. 2399904Domain d4f2ze_: 4f2z E: [307342]
        automated match to d3fsna_
        complexed with fe2
    2. Domain for 4f30:
    3. Domains for 4rse:
      1. 2399899Domain d4rsea_: 4rse A: [309526]
        automated match to d3fsna_
        complexed with a6v, fe2, plm
      2. 2399900Domain d4rseb_: 4rse B: [309527]
        automated match to d3fsna_
        complexed with a6v, fe2, plm
    4. Domains for 4ryy:
      1. 2399897Domain d4ryya_: 4ryy A: [309615]
        automated match to d3fsna_
        complexed with a3v, fe2, plm
      2. 2399898Domain d4ryyb_: 4ryy B: [309616]
        automated match to d3fsna_
        complexed with a3v, fe2, plm
    5. Domains for 4ryz:
      1. 2399901Domain d4ryza_: 4ryz A: [309617]
        automated match to d3fsna_
        complexed with a5v, fe2, plm
      2. 2399902Domain d4ryzb_: 4ryz B: [309618]
        automated match to d3fsna_
        complexed with a5v, fe2, plm
    6. Domains for 4zhk:
      1. 2399895Domain d4zhka_: 4zhk A: [310116]
        automated match to d3fsna_
        complexed with a8v, a9v, fe2, na, pg4, pge
      2. 2399896Domain d4zhkb_: 4zhk B: [310117]
        automated match to d3fsna_
        complexed with a8v, a9v, fe2, na, pg4, pge
  2. 2399906Synechocystis sp. [TaxId:1111708] [311494] (7 PDB entries)
    1. Domains for 5kja:
      1. 2399912Domain d5kjaa_: 5kja A: [320569]
        automated match to d5e47b_
        complexed with cl, fe2; mutant
      2. 2399913Domain d5kjab_: 5kja B: [320443]
        automated match to d5e47b_
        complexed with cl, fe2; mutant
      3. 2399914Domain d5kjac_: 5kja C: [320514]
        automated match to d5e47b_
        complexed with cl, fe2; mutant
      4. 2399915Domain d5kjad_: 5kja D: [320537]
        automated match to d5e47b_
        complexed with cl, fe2; mutant
      5. 2399916Domain d5kjae_: 5kja E: [320484]
        automated match to d5e47b_
        complexed with cl, fe2; mutant
    2. Domains for 5kjb:
      1. 2399917Domain d5kjba_: 5kjb A: [320492]
        automated match to d5e47b_
        complexed with fe2; mutant
      2. 2399918Domain d5kjbb_: 5kjb B: [320449]
        automated match to d5e47b_
        complexed with fe2; mutant
      3. 2399919Domain d5kjbc_: 5kjb C: [320496]
        automated match to d5e47b_
        complexed with fe2; mutant
      4. 2399920Domain d5kjbd_: 5kjb D: [320476]
        automated match to d5e47b_
        complexed with fe2; mutant
      5. 2399921Domain d5kjbe_: 5kjb E: [320499]
        automated match to d5e47b_
        complexed with fe2; mutant
    3. Domains for 5kjd:
      1. 2399907Domain d5kjda_: 5kjd A: [320470]
        automated match to d5e47b_
        complexed with fe2; mutant
      2. 2399908Domain d5kjdb_: 5kjd B: [320462]
        automated match to d5e47b_
        complexed with fe2; mutant
      3. 2399909Domain d5kjdc_: 5kjd C: [320505]
        automated match to d5e47b_
        complexed with fe2; mutant
      4. 2399910Domain d5kjdd_: 5kjd D: [320530]
        automated match to d5e47b_
        complexed with fe2; mutant
      5. 2399911Domain d5kjde_: 5kjd E: [320460]
        automated match to d5e47b_
        complexed with fe2; mutant
    4. Domains for 5kk0:
      1. 2399922Domain d5kk0a_: 5kk0 A: [319586]
        automated match to d5e47b_
        complexed with cl, fe2; mutant
      2. 2399923Domain d5kk0b_: 5kk0 B: [319611]
        automated match to d5e47b_
        complexed with cl, fe2; mutant
      3. 2399924Domain d5kk0c_: 5kk0 C: [319591]
        automated match to d5e47b_
        complexed with cl, fe2; mutant
      4. 2399925Domain d5kk0d_: 5kk0 D: [319587]
        automated match to d5e47b_
        complexed with cl, fe2; mutant
    5. Domains for 6c7k:
      1. 3051334Domain d6c7ka_: 6c7k A: [351396]
        automated match to d5kjba_
        complexed with cl, fe2
      2. 3051474Domain d6c7kd_: 6c7k D: [351536]
        automated match to d5kjba_
        complexed with cl, fe2
      3. 3051526Domain d6c7kb_: 6c7k B: [351588]
        automated match to d5kjba_
        complexed with cl, fe2
      4. 3051554Domain d6c7kc_: 6c7k C: [351616]
        automated match to d5kjba_
        complexed with cl, fe2
    6. Domains for 6c7o:
      1. 3051335Domain d6c7oa_: 6c7o A: [351397]
        automated match to d5kjba_
        complexed with fe2
      2. 3051409Domain d6c7ob_: 6c7o B: [351471]
        automated match to d5kjba_
        complexed with fe2
    7. Domains for 6c7p:
      1. 3051361Domain d6c7pa_: 6c7p A: [351423]
        automated match to d5kjba_
        complexed with fe2
      2. 3051548Domain d6c7pb_: 6c7p B: [351610]
        automated match to d5kjba_
        complexed with fe2

More info for Protein automated matches from b.69.15.1: RPE65-like

Timeline for Protein automated matches from b.69.15.1: RPE65-like: