Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2874827Fold c.44: Phosphotyrosine protein phosphatases I-like [52787] (3 superfamilies)
    3 layers: a/b/a; parallel beta-sheet of 4 strands, order 2134
  4. 2875028Superfamily c.44.3: PIWI domain N-terminal-like [310581] (2 families) (S)
  5. 2875080Family c.44.3.0: automated matches [310677] (1 protein)
    not a true family
  6. 2875081Protein automated matches [310878] (2 species)
    not a true protein

Species:

  1. 2875082Human (Homo sapiens) [TaxId:9606] [311393] (6 PDB entries)
    1. Domain for 4kre:
    2. Domain for 4krf:
    3. Domain for 4kxt:
    4. Domain for 5w6v:
    5. Domains for 7c6b:
      1. 2875084Domain d7c6ba_: 7c6b A: [394457]
        automated match to d3vnba_
        protein/RNA complex; complexed with k2r, po4
      2. 2875085Domain d7c6bb_: 7c6b B: [394454]
        automated match to d3vnba_
        protein/RNA complex; complexed with k2r, po4
      3. 2875086Domain d7c6bc_: 7c6b C: [394403]
        automated match to d3vnba_
        protein/RNA complex; complexed with k2r, po4
    6. Domains for 7d7u:
      1. 2875089Domain d7d7ua_: 7d7u A: [394517]
        automated match to d3vnba_
        protein/RNA complex; complexed with 8br
      2. 2875090Domain d7d7ub_: 7d7u B: [394506]
        automated match to d3vnba_
        protein/RNA complex; complexed with 8br
      3. 2875091Domain d7d7uc_: 7d7u C: [394508]
        automated match to d3vnba_
        protein/RNA complex; complexed with 8br
  2. 2875093Thale cress (Arabidopsis thaliana) [TaxId:3702] [311344] (9 PDB entries)
    1. Domain for 3vna:
    2. Domain for 3vnb:
    3. Domains for 4g0m:
      1. 2875103Domain d4g0ma_: 4g0m A: [345277]
        automated match to d3vnba_
        complexed with so4
      2. 2875104Domain d4g0mb_: 4g0m B: [345278]
        automated match to d3vnba_
        complexed with so4
    4. Domains for 4g0o:
      1. 2875101Domain d4g0oa1: 4g0o A:562-699 [307398]
        Other proteins in same PDB: d4g0oa2
        automated match to d3luha_
        complexed with so4
      2. 2875102Domain d4g0ob_: 4g0o B: [307400]
        Other proteins in same PDB: d4g0oa2
        automated match to d3luha_
        complexed with so4
    5. Domain for 4g0p:
    6. Domain for 4g0q:
    7. Domain for 4g0x:
    8. Domain for 4g0y:
    9. Domain for 4g0z:

More info for Protein automated matches from c.44.3.0: automated matches

Timeline for Protein automated matches from c.44.3.0: automated matches: