Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2078525Fold b.181: Handle domain of Transferrin binding protein TbpB-like [310564] (1 superfamily)
    2 layers; antiparallel B-sheet, order 1432 or 216543, flanked by alpha helix or 2-strand beta hairpin
  4. 2078526Superfamily b.181.1: Handle domain of Transferrin binding protein TbpB-like [310592] (2 families) (S)
    C-terminal part of Pfam PF01298
  5. 2078535Family b.181.1.0: automated matches [310674] (1 protein)
    not a true family
  6. 2078536Protein automated matches [310874] (3 species)
    not a true protein

Species:

  1. 2078537Actinobacillus pleuropneumoniae [TaxId:715] [311327] (4 PDB entries)
    1. Domains for 3pqs:
      1. 2078538Domain d3pqsa1: 3pqs A:25-137 [306260]
        Other proteins in same PDB: d3pqsa2, d3pqsa4
        automated match to d3hola3
        complexed with cac, gol
      2. 2078539Domain d3pqsa3: 3pqs A:296-384 [306262]
        Other proteins in same PDB: d3pqsa2, d3pqsa4
        automated match to d3hola4
        complexed with cac, gol
    2. Domains for 4o3y:
      1. 2078542Domain d4o3ya1: 4o3y A:26-137 [307804]
        Other proteins in same PDB: d4o3ya2, d4o3ya4
        automated match to d3hola3
        complexed with act, gol; mutant
      2. 2078543Domain d4o3ya3: 4o3y A:296-384 [307806]
        Other proteins in same PDB: d4o3ya2, d4o3ya4
        automated match to d3hola4
        complexed with act, gol; mutant
    3. Domains for 4o3z:
      1. 2078544Domain d4o3za1: 4o3z A:26-137 [307808]
        Other proteins in same PDB: d4o3za2, d4o3za4
        automated match to d3hola3
        complexed with act, gol; mutant
      2. 2078545Domain d4o3za3: 4o3z A:296-384 [307810]
        Other proteins in same PDB: d4o3za2, d4o3za4
        automated match to d3hola4
        complexed with act, gol; mutant
    4. Domains for 4o49:
      1. 2078540Domain d4o49a1: 4o49 A:26-137 [307812]
        Other proteins in same PDB: d4o49a2, d4o49a4
        automated match to d3hola3
        complexed with act, gol; mutant
      2. 2078541Domain d4o49a3: 4o49 A:296-384 [307814]
        Other proteins in same PDB: d4o49a2, d4o49a4
        automated match to d3hola4
        complexed with act, gol; mutant
  2. 2078546Haemophilus parasuis [TaxId:738] [311403] (2 PDB entries)
    1. Domains for 4o4u:
      1. 2078547Domain d4o4ua1: 4o4u A:25-135 [307816]
        Other proteins in same PDB: d4o4ua2, d4o4ua4, d4o4ub2, d4o4ub4, d4o4uc2, d4o4uc4, d4o4ud2, d4o4ud4
        automated match to d3hola3
        complexed with gol; mutant
      2. 2078548Domain d4o4ua3: 4o4u A:300-390 [307818]
        Other proteins in same PDB: d4o4ua2, d4o4ua4, d4o4ub2, d4o4ub4, d4o4uc2, d4o4uc4, d4o4ud2, d4o4ud4
        automated match to d3hola4
        complexed with gol; mutant
      3. 2078549Domain d4o4ub1: 4o4u B:25-135 [307820]
        Other proteins in same PDB: d4o4ua2, d4o4ua4, d4o4ub2, d4o4ub4, d4o4uc2, d4o4uc4, d4o4ud2, d4o4ud4
        automated match to d3hola3
        complexed with gol; mutant
      4. 2078550Domain d4o4ub3: 4o4u B:300-390 [307822]
        Other proteins in same PDB: d4o4ua2, d4o4ua4, d4o4ub2, d4o4ub4, d4o4uc2, d4o4uc4, d4o4ud2, d4o4ud4
        automated match to d3hola4
        complexed with gol; mutant
      5. 2078551Domain d4o4uc1: 4o4u C:26-135 [307824]
        Other proteins in same PDB: d4o4ua2, d4o4ua4, d4o4ub2, d4o4ub4, d4o4uc2, d4o4uc4, d4o4ud2, d4o4ud4
        automated match to d3hola3
        complexed with gol; mutant
      6. 2078552Domain d4o4uc3: 4o4u C:300-390 [307826]
        Other proteins in same PDB: d4o4ua2, d4o4ua4, d4o4ub2, d4o4ub4, d4o4uc2, d4o4uc4, d4o4ud2, d4o4ud4
        automated match to d3hola4
        complexed with gol; mutant
      7. 2078553Domain d4o4ud1: 4o4u D:25-135 [307828]
        Other proteins in same PDB: d4o4ua2, d4o4ua4, d4o4ub2, d4o4ub4, d4o4uc2, d4o4uc4, d4o4ud2, d4o4ud4
        automated match to d3hola3
        complexed with gol; mutant
      8. 2078554Domain d4o4ud3: 4o4u D:300-390 [307830]
        Other proteins in same PDB: d4o4ua2, d4o4ua4, d4o4ub2, d4o4ub4, d4o4uc2, d4o4uc4, d4o4ud2, d4o4ud4
        automated match to d3hola4
        complexed with gol; mutant
    2. Domains for 4o4x:
      1. 2078555Domain d4o4xa1: 4o4x A:25-135 [307832]
        Other proteins in same PDB: d4o4xa2, d4o4xa4, d4o4xb2, d4o4xb4
        automated match to d3hola3
        complexed with gol, na, so4; mutant
      2. 2078556Domain d4o4xa3: 4o4x A:300-390 [307834]
        Other proteins in same PDB: d4o4xa2, d4o4xa4, d4o4xb2, d4o4xb4
        automated match to d3hola4
        complexed with gol, na, so4; mutant
      3. 2078557Domain d4o4xb1: 4o4x B:25-135 [307836]
        Other proteins in same PDB: d4o4xa2, d4o4xa4, d4o4xb2, d4o4xb4
        automated match to d3hola3
        complexed with gol, na, so4; mutant
      4. 2078558Domain d4o4xb3: 4o4x B:300-390 [307838]
        Other proteins in same PDB: d4o4xa2, d4o4xa4, d4o4xb2, d4o4xb4
        automated match to d3hola4
        complexed with gol, na, so4; mutant
  3. 2293516Neisseria meningitidis [TaxId:487] [336817] (1 PDB entry)

More info for Protein automated matches from b.181.1.0: automated matches

Timeline for Protein automated matches from b.181.1.0: automated matches:

  • Protein automated matches from b.181.1.0: automated matches is new in SCOPe 2.06-stable