SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class h: Coiled coil proteins [57942] (7 folds)
Fold h.4: Antiparallel coiled-coil [58086] (19 superfamilies)
this is not a true fold; contains at least two very long antiparallel helices

Superfamily h.4.20: V-type ATPase central rotor subunit D [310580] (2 families)

Role similar to F1 ATP synthase gamma (c.49.2), but do not appear to be homologous
Has 2 antiparallel beta strands in addition to coiled coils; see PubMed 25971514

Family h.4.20.0: automated matches [310670] (1 protein)
not a true family
Protein automated matches [310867] (3 species)
not a true protein

Species:

Enterococcus hirae [TaxId:1354] [311269] (3 PDB entries)

Domain for 3aon:
- Domain d3aona_: 3aon A: [305000]
  automated match to d3a5cg_
  complexed with no3
Domain for 3vr4:
- Domain d3vr4g_: 3vr4 G: [306705]
  Other proteins in same PDB: d3vr4d1, d3vr4d2, d3vr4d3, d3vr4e1, d3vr4e2, d3vr4e3, d3vr4f1, d3vr4f2, d3vr4f3
  automated match to d3a5cg_
  complexed with b3p, cl, gol

Domain for 3vr6:

Domain d3vr6g1: 3vr6 G:2-207 [306715]
Other proteins in same PDB: d3vr6d1, d3vr6d2, d3vr6d3, d3vr6e1, d3vr6e2, d3vr6e3, d3vr6f1, d3vr6f2, d3vr6f3, d3vr6g2
automated match to d3a5cg_
complexed with anp, mg

Enterococcus hirae [TaxId:768486] [324701] (2 PDB entries)
1. Domain for 5knc:
  - Domain d5kncg_: 5knc G: [324760]
    Other proteins in same PDB: d5kncd1, d5kncd2, d5kncd3, d5knce1, d5knce2, d5knce3, d5kncf1, d5kncf2, d5kncf3
    automated match to d3a5cg_
    complexed with adp, gol, mg, so4
2. Domain for 5knd:
  - Domain d5kndg_: 5knd G: [324702]
    Other proteins in same PDB: d5kndd1, d5kndd2, d5kndd3, d5knde1, d5knde2, d5knde3, d5kndf1, d5kndf2, d5kndf3
    automated match to d3a5cg_
    complexed with b3p, gol, mg, po4

Human (Homo sapiens) [TaxId:9606] [396097] (2 PDB entries)

Domain for 6wlz:
- Domain d6wlzg_: 6wlz G: [396098]
  Other proteins in same PDB: d6wlzd1, d6wlzd2, d6wlzd3, d6wlze1, d6wlze2, d6wlze3, d6wlzf1, d6wlzf2, d6wlzf3, d6wlzn_
  automated match to d5kncg_
  complexed with adp

Domain for 6wm2:

Domain d6wm2g_: 6wm2 G: [396116]
Other proteins in same PDB: d6wm2d1, d6wm2d2, d6wm2d3, d6wm2e1, d6wm2e2, d6wm2e3, d6wm2f1, d6wm2f2, d6wm2f3, d6wm2n_, d6wm2q_
automated match to d5kncg_
complexed with adp, clr, nag, psf, pty, wjp, wjs, wss

More info for Protein automated matches from h.4.20.0: automated matches

Timeline for Protein automated matches from h.4.20.0: automated matches:

Protein automated matches from h.4.20.0: automated matches first appeared in SCOPe 2.06
Protein automated matches from h.4.20.0: automated matches appears in SCOPe 2.07