Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2149822Fold c.110: DTD-like [69499] (1 superfamily)
    beta(2)-(alpha-beta)2-beta(3); 3 layers, a/b/b; some topological similarity to the N-terminal domain of MinC
  4. 2149823Superfamily c.110.1: DTD-like [69500] (3 families) (S)
    active form is a dimer
  5. 2149839Family c.110.1.2: Archaea-specific editing domain of threonyl-tRNA synthetase (Pab-NTD) [310661] (2 protein domains)
    Pfam PF08915
  6. 2149847Protein automated matches [310853] (2 species)
    not a true protein

Species:

  1. 2149848Pyrococcus abyssi [TaxId:272844] [311435] (8 PDB entries)
    1. Domains for 4rrq:
      1. 2149849Domain d4rrqa_: 4rrq A: [309518]
        automated match to d1y2qa_
        complexed with a3s; mutant
      2. 2149850Domain d4rrqb_: 4rrq B: [309519]
        automated match to d1y2qa_
        complexed with a3s; mutant
    2. Domains for 4rrr:
      1. 2149851Domain d4rrra_: 4rrr A: [309520]
        automated match to d1y2qa_
        complexed with a3t; mutant
      2. 2149852Domain d4rrrb_: 4rrr B: [309521]
        automated match to d1y2qa_
        complexed with a3t; mutant
    3. Domain for 4s02:
    4. Domain for 4s03:
    5. Domain for 4s0i:
    6. Domain for 4s0j:
    7. Domain for 4s0k:
    8. Domain for 4s0l:
  2. 2149859Pyrococcus abyssi [TaxId:29292] [311214] (5 PDB entries)
    1. Domains for 2hl1:
      1. 2149864Domain d2hl1a_: 2hl1 A: [304024]
        automated match to d1y2qa_
        protein/RNA complex; complexed with a3s
      2. 2149865Domain d2hl1b_: 2hl1 B: [304025]
        automated match to d1y2qa_
        protein/RNA complex; complexed with a3s
    2. Domains for 3pd2:
      1. 2149862Domain d3pd2a_: 3pd2 A: [306226]
        automated match to d1y2qa_
        protein/RNA complex; complexed with a3s
      2. 2149863Domain d3pd2b_: 3pd2 B: [306227]
        automated match to d1y2qa_
        protein/RNA complex; complexed with a3s
    3. Domains for 3pd3:
      1. 2149860Domain d3pd3a_: 3pd3 A: [306228]
        automated match to d1y2qa_
        protein/RNA complex; complexed with a3t
      2. 2149861Domain d3pd3b_: 3pd3 B: [306229]
        automated match to d1y2qa_
        protein/RNA complex; complexed with a3t
    4. Domains for 3pd4:
      1. 2149868Domain d3pd4a_: 3pd4 A: [306230]
        automated match to d1y2qa_
        protein/RNA complex; complexed with a3g
      2. 2149869Domain d3pd4b_: 3pd4 B: [306231]
        automated match to d1y2qa_
        protein/RNA complex; complexed with a3g
    5. Domains for 3pd5:
      1. 2149866Domain d3pd5a_: 3pd5 A: [306232]
        automated match to d1y2qa_
        protein/RNA complex; complexed with gol, tsb
      2. 2149867Domain d3pd5b_: 3pd5 B: [306233]
        automated match to d1y2qa_
        protein/RNA complex; complexed with gol, tsb

More info for Protein automated matches from c.110.1.2: Archaea-specific editing domain of threonyl-tRNA synthetase (Pab-NTD)

Timeline for Protein automated matches from c.110.1.2: Archaea-specific editing domain of threonyl-tRNA synthetase (Pab-NTD):

  • Protein automated matches from c.110.1.2: Archaea-specific editing domain of threonyl-tRNA synthetase (Pab-NTD) is new in SCOPe 2.06-stable