Lineage for Family d.3.1.23: Papain-like viral protease catalytic domain

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2533756Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2533757Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2534714Family d.3.1.23: Papain-like viral protease catalytic domain [310648] (2 proteins)
    C-terminal part of Pfam PF08715

Proteins:

  1. 2534715Papain-like protease PLpro, catalytic domain [310795] (4 species)
    1. 2534716Species Human betacoronavirus 2c EMC/2012 [TaxId:1235996] [311055] (5 PDB entries)
    2. 2534722Species Human betacoronavirus 2c jordan-n3/2012 [TaxId:1306931] [311427] (5 PDB entries)
    3. 2534730Species SARS coronavirus [TaxId:227859] [311054] (1 PDB entry)
    4. 2534734Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [383236] (1 PDB entry)
  2. 2534738automated matches [310868] (6 species)
    not a true protein
    1. 2534739Species Betacoronavirus england 1 [TaxId:1263720] [311420] (1 PDB entry)
    2. 2534742Species Human coronavirus emc [TaxId:1263720] [311464] (1 PDB entry)
    3. 2534744Species Human sars coronavirus [TaxId:227859] [333837] (3 PDB entries)
    4. 2534749Species SARS coronavirus [TaxId:227859] [311282] (4 PDB entries)
    5. 2534755Species Sars coronavirus [TaxId:228330] [311412] (2 PDB entries)
    6. 2534758Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [385225] (32 PDB entries)

More info for Family d.3.1.23: Papain-like viral protease catalytic domain

Timeline for Family d.3.1.23: Papain-like viral protease catalytic domain: