Lineage for Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2166092Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. 2166093Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families) (S)
    contains extra C-terminal strand 5, order 21345
  5. 2166304Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains [310632] (5 proteins)
    strand 5 is parallel to strand 4
    Pfam PF08210; Pfam PF05240

Proteins:

  1. 2166305APOBEC2 (APO2) [310756] (1 species)
  2. 2166311APOBEC3A [310759] (1 species)
  3. 2166316APOBEC3F [310758] (1 species)
  4. 2166324APOBEC3G (ARCD) [310757] (1 species)
  5. 2166328automated matches [310855] (3 species)
    not a true protein
    1. 2166329Species Human (Homo sapiens) [TaxId:9606] [311219] (18 PDB entries)
    2. 2166359Species Macaca mulatta [TaxId:9544] [321104] (2 PDB entries)
    3. 2166370Species Mouse (Mus musculus) [TaxId:10090] [311244] (1 PDB entry)

More info for Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains

Timeline for Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains:

  • Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains is new in SCOPe 2.06-stable
  • Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains appears in the current release, SCOPe 2.07