SCOPe 2.06: Domain d5avsb2: 5avs B:69-305

Lineage for d5avsb2 (5avs B:69-305)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.32: Sodium/potassium-transporting ATPase, beta subunit extracellular domain [310575] (1 family)
   May be homologous to IL1R (49177), according to PubMed 18075585

5. Family b.1.32.1: Sodium/potassium-transporting ATPase, beta subunit extracellular domain [310613] (2 proteins)

6. Protein Sodium/potassium-transporting ATPase, beta subunit extracellular domain [310696] (1 species)

7. Species Dogfish (Squalus acanthias) [TaxId:7797] [310918] (14 PDB entries)

8. Domain d5avsb2: 5avs B:69-305 [310226]
   Other proteins in same PDB: d5avsa1, d5avsa2, d5avsa3, d5avsa4, d5avsb1, d5avsg_
   automated match to d2zxeb2
   complexed with clr, k, mf4, mg, nag, tl

Details for d5avsb2

PDB Entry: 5avs, 2.9 Å

PDB Description: kinetics by x-ray crystallography: tl+-substitution of bound k+ in the e2.mgf42-.2k+ crystal after 3.5 min

PDB Compounds: (B:) Na+,K+-ATPase beta subunit

SCOPe Domain Sequences for d5avsb2:

Sequence, based on SEQRES records:

>d5avsb2 b.1.32.1 (B:69-305) Sodium/potassium-transporting ATPase, beta subunit extracellular domain {Dogfish (Squalus acanthias) [TaxId: 7797]}
yqdrvappglshapyaikteisfsisnpksyesfvksmhklmdlynessqagnspfedcs
dtpadyikrgdlddsqgqkkacrfsrmwlkncsglddttygyaegkpcvvaklnriigfy
pkplknttdlpeelqanynqyvlplrcaakreedrekigsieyfglggyagfplqyypyy
gkrlqkkylqpllaiqftnltqnmelrieckvygenidysekdrfrgrfevkievks

Sequence, based on observed residues (ATOM records):

>d5avsb2 b.1.32.1 (B:69-305) Sodium/potassium-transporting ATPase, beta subunit extracellular domain {Dogfish (Squalus acanthias) [TaxId: 7797]}
yqdrvappglshapyaikteisfsisnpksyesfvksmhklmdlynessqagnspfedcs
dtpadyikrgdlddsqgqkkacrfsrmwlkncgyaegkpcvvaklnriigfypkplkntt
dlpeelqanynqyvlplrcaarekigsieyfglggyagfplqyypyygkrlqkkylqpll
aiqftnltqnmelrieckvygenidysekdrfrgrfevkievks

Timeline for d5avsb2:

• d5avsb2 is new in SCOPe 2.06-stable
  
• d5avsb2 appears in SCOPe 2.07
  
• d5avsb2 appears in the current release, SCOPe 2.08