SCOPe 2.06: Domain d5apka1: 5apk A:265-486

Lineage for d5apka1 (5apk A:265-486)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.0: automated matches [191623] (1 protein)
   not a true family

6. Protein automated matches [191142] (6 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [189274] (54 PDB entries)

8. Domain d5apka1: 5apk A:265-486 [310192]
   Other proteins in same PDB: d5apka2
   automated match to d1n83a_
   complexed with 76e

Details for d5apka1

PDB Entry: 5apk, 2.1 Å

PDB Description: ligand complex of rorg lbd

PDB Compounds: (A:) Nuclear receptor ROR-gamma

SCOPe Domain Sequences for d5apka1:

Sequence; same for both SEQRES and ATOM records:

>d5apka1 a.123.1.0 (A:265-486) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aslteiehlvqsvcksyretcqlrledllrqrsnifsreevtgyqrksmwemwercahhl
teaiqyvvefakrlsgfmelcqndqivllkagamevvlvrmcraynadnrtvffegkygg
melfralgcselissifdfshslsalhfsedeialytalvlinahrpglqekrkveqlqy
nlelafhhhlckthrqsilaklppkgklrslcsqhverlqif

Timeline for d5apka1:

• d5apka1 is new in SCOPe 2.06-stable
  
• d5apka1 appears in SCOPe 2.07
  
• d5apka1 appears in the current release, SCOPe 2.08