Lineage for d4y6qd_ (4y6q D:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2107255Fold c.31: DHS-like NAD/FAD-binding domain [52466] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like
  4. 2107256Superfamily c.31.1: DHS-like NAD/FAD-binding domain [52467] (7 families) (S)
    binds cofactor molecules in the opposite direction than classical Rossmann fold
  5. 2107522Family c.31.1.5: Sir2 family of transcriptional regulators [63984] (8 protein domains)
    silent information regulator 2; contains insertion of a rubredoxin-like zinc finger domain
  6. 2107583Protein automated matches [191258] (3 species)
    not a true protein
  7. 2107587Species Human (Homo sapiens) [TaxId:9606] [189817] (16 PDB entries)
  8. 2107610Domain d4y6qd_: 4y6q D: [310103]
    automated match to d1j8fc_
    complexed with omr, zn

Details for d4y6qd_

PDB Entry: 4y6q (more details), 1.9 Å

PDB Description: human sirt2 in complex with 2-o-myristoyl-adp-ribose
PDB Compounds: (D:) nad-dependent protein deacetylase sirtuin-2

SCOPe Domain Sequences for d4y6qd_:

Sequence, based on SEQRES records: (download)

>d4y6qd_ c.31.1.5 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
erlldeltlegvarymqsercrrviclvgagistsagipdfrspstglydnlekyhlpyp
eaifeisyfkkhpepffalakelypgqfkptichyfmrllkdkglllrcytqnidtleri
agleqedlveahgtfytshcvsascrheyplswmkekifsevtpkcedcqslvkpdivff
geslparffscmqsdflkvdlllvmgtslqvqpfasliskaplstprllinkekaggggm
dfdskkayrdvawlgecdqgclalaellgwkkeledlvrrehasida

Sequence, based on observed residues (ATOM records): (download)

>d4y6qd_ c.31.1.5 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
erlldeltlegvarymqsercrrviclvgagistsagipdfrspsteaifeisyfkkhpe
pffalakelypgqfkptichyfmrllkdkglllrcytqnidtleriagleqedlveahgt
fytshcvsascrheyplswmkekifsevtpkcedcqslvkpdivffgeslparffscmqs
dflkvdlllvmgtslqvqpfasliskaplstprllinkekagggmdfdskkayrdvawlg
ecdqgclalaellgwkkeledlvrrehasida

SCOPe Domain Coordinates for d4y6qd_:

Click to download the PDB-style file with coordinates for d4y6qd_.
(The format of our PDB-style files is described here.)

Timeline for d4y6qd_:

  • d4y6qd_ is new in SCOPe 2.06-stable