Lineage for d4xbba1 (4xbb A:1-173)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2055629Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 2055630Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 2057856Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (5 protein domains)
  6. 2058054Protein automated matches [190384] (19 species)
    not a true protein
  7. 2058125Species Norwalk virus (strain gi/human/united states/norwalk/1968) [TaxId:524364] [311468] (3 PDB entries)
  8. 2058129Domain d4xbba1: 4xbb A:1-173 [309993]
    Other proteins in same PDB: d4xbba2
    automated match to d2fyqa_
    complexed with 3zr, so4

Details for d4xbba1

PDB Entry: 4xbb (more details), 1.85 Å

PDB Description: 1.85a resolution structure of norovirus 3cl protease complex with a covalently bound dipeptidyl inhibitor diethyl [(1r,2s)-2-[(n-{[(3- chlorobenzyl)oxy]carbonyl}-3-cyclohexyl-l-alanyl)amino]-1-hydroxy-3- (2-oxo-2h-pyrrol-3-yl)propyl]phosphonate
PDB Compounds: (A:) 3C-like protease

SCOPe Domain Sequences for d4xbba1:

Sequence, based on SEQRES records: (download)

>d4xbba1 b.47.1.4 (A:1-173) automated matches {Norwalk virus (strain gi/human/united states/norwalk/1968) [TaxId: 524364]}
apptlwsrvtkfgsgwgfwvsptvfittthvvptgvkeffgeplssiaihqageftqfrf
skkmrpdltgmvleegcpegtvcsvlikrdsgellplavrmgaiasmriqgrlvhgqsgm
lltganakgmdlgtipgdcgapyvhkrgndwvvcgvhaaatksgntvvcavqa

Sequence, based on observed residues (ATOM records): (download)

>d4xbba1 b.47.1.4 (A:1-173) automated matches {Norwalk virus (strain gi/human/united states/norwalk/1968) [TaxId: 524364]}
apptlwsrvtkfgsgwgfwvsptvfittthvvptgvkeffgeplssiaihqageftqfrf
skkmrpdltgmvleegcpegtvcsvlikrdsgellplavrmgaiasmriqgrlvhgqsgm
llgtipgdcgapyvhkrgndwvvcgvhaaatksgntvvcavqa

SCOPe Domain Coordinates for d4xbba1:

Click to download the PDB-style file with coordinates for d4xbba1.
(The format of our PDB-style files is described here.)

Timeline for d4xbba1:

  • d4xbba1 is new in SCOPe 2.06-stable

View in 3D
Domains from same chain:
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d4xbba2