Lineage for d4x2yb_ (4x2y B:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2055629Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 2055630Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 2057856Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (5 protein domains)
  6. 2058054Protein automated matches [190384] (19 species)
    not a true protein
  7. 2058111Species Murine norovirus 1 [TaxId:223997] [311357] (5 PDB entries)
  8. 2058119Domain d4x2yb_: 4x2y B: [309955]
    automated match to d2fyqa_
    mutant

Details for d4x2yb_

PDB Entry: 4x2y (more details), 2.42 Å

PDB Description: crystal structure of a chimeric murine norovirus ns6 protease (inactive c139a mutant) in which the p4-p4 prime residues of the cleavage junction in the extended c-terminus have been replaced by the corresponding residues from the ns2-3 junction.
PDB Compounds: (B:) NS6 Protease,NS6 Protease

SCOPe Domain Sequences for d4x2yb_:

Sequence, based on SEQRES records: (download)

>d4x2yb_ b.47.1.4 (B:) automated matches {Murine norovirus 1 [TaxId: 223997]}
siwsrvvqfgtgwgfwvsghvfitakhvappkgteifgrkpgdftvtssgdflkyyftsa
vrpdipamvlengcqegvvasvlvkrasgemlalavrmgsqaaikigsavvhgqtgmllt
gsnakaqdlgtipgdagcpyvykkgntwvvigvhvaatrsgntviaathgeptleawqa

Sequence, based on observed residues (ATOM records): (download)

>d4x2yb_ b.47.1.4 (B:) automated matches {Murine norovirus 1 [TaxId: 223997]}
siwsrvvqfgtgwgfwvsghvfitakhvappkgteifgrkpgdftvtssgdflkyyftsa
vrpdipamvlengcqegvvasvlvkrasgemlalavrmgsqaaikigsavvhgqtgmllt
gsndlgtipgdagcpyvykkgntwvvigvhvaatrsgntviaathgeptleawqa

SCOPe Domain Coordinates for d4x2yb_:

Click to download the PDB-style file with coordinates for d4x2yb_.
(The format of our PDB-style files is described here.)

Timeline for d4x2yb_:

  • d4x2yb_ is new in SCOPe 2.06-stable

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Domains from other chains:
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d4x2ya_