Lineage for d4rnaa2 (4rna A:62-322)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2154577Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2154578Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2155396Family d.3.1.23: Papain-like viral protease catalytic domain [310648] (2 protein domains)
    C-terminal part of Pfam PF08715
  6. 2155397Protein Papain-like protease PLpro, catalytic domain [310795] (3 species)
  7. 2155398Species Human betacoronavirus 2c EMC/2012 [TaxId:1235996] [311055] (3 PDB entries)
  8. 2155399Domain d4rnaa2: 4rna A:62-322 [309477]
    Other proteins in same PDB: d4rnaa1
    automated match to d4p16a2
    complexed with po4, zn

Details for d4rnaa2

PDB Entry: 4rna (more details), 1.79 Å

PDB Description: crystal structure of plpro from middle east respiratory syndrome (mers) coronavirus
PDB Compounds: (A:) papain-like protease

SCOPe Domain Sequences for d4rnaa2:

Sequence; same for both SEQRES and ATOM records: (download)

>d4rnaa2 d.3.1.23 (A:62-322) Papain-like protease PLpro, catalytic domain {Human betacoronavirus 2c EMC/2012 [TaxId: 1235996]}

SCOPe Domain Coordinates for d4rnaa2:

Click to download the PDB-style file with coordinates for d4rnaa2.
(The format of our PDB-style files is described here.)

Timeline for d4rnaa2:

  • d4rnaa2 is new in SCOPe 2.06-stable

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Domains from same chain:
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