SCOPe 2.06: Domain d4r9ga_: 4r9g A:

Lineage for d4r9ga_ (4r9g A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.0: automated matches [191309] (1 protein)
   not a true family

6. Protein automated matches [190039] (140 species)
   not a true protein

7. Species Caldanaerobius polysaccharolyticus [TaxId:44256] [311425] (2 PDB entries)

8. Domain d4r9ga_: 4r9g A: [309419]
   automated match to d4c1ua_
   complexed with zn

Details for d4r9ga_

PDB Entry: 4r9g, 2.2 Å

PDB Description: cpmnbp1 with mannotriose bound

PDB Compounds: (A:) mbp1

SCOPe Domain Sequences for d4r9ga_:

Sequence, based on SEQRES records:

>d4r9ga_ c.94.1.0 (A:) automated matches {Caldanaerobius polysaccharolyticus [TaxId: 44256]}
qvvltlwypwagpdgdavvslakeyskthpnvqikaqmvsgagiaatqgggqgkflsava
agnppdlvlywgqdalpgladqgaiiplddylkdvdtskffeaaynamkykgkiyglpem
vnvrvlfwnkdlfkqagldpntppktiaeldqmaakltktkngtieqmgfipwigqgvph
vmagvfgtslvdsngnpilspdknpqllnllkwevsysdkygamninkfiagmsqnssqa
ndpfvlgkvammisgewqinankqynpklnfgvgpipqapggkpmpslmdgntwmipkgs
khpqeamdfikwtmdpqriadtadkvyniapiveaakiqklnndpyfkevlnvaqkgsiy
ytpaakgmlstetaannafqaaqykkstpeqalknaqaeae

Sequence, based on observed residues (ATOM records):

>d4r9ga_ c.94.1.0 (A:) automated matches {Caldanaerobius polysaccharolyticus [TaxId: 44256]}
qvvltlwypwagpdgdavvslakeyskthpnvqikaqmvsgagiaakflsavaagnppdl
vlywgqdalpgladqgaiiplddylkdvdtskffeaaynamkykgkiyglpemvnvrvlf
wnkdlfkqagldpntppktiaeldqmaakltktkngtieqmgfipwigqgvphvmagvfg
tslvdsngnpilspdknpqllnllkwevsysdkygamninkfiagmsqnssqandpfvlg
kvammisgewqinankqynpklnfgvgpipqapggkpmpslmdgntwmipkgskhpqeam
dfikwtmdpqriadtadkvyniapiveaakiqklnndpyfkevlnvaqkgsiyytpaakg
mlstetaannafqaaqykkstpeqalknaqaeae

Timeline for d4r9ga_:

• d4r9ga_ is new in SCOPe 2.06-stable
  
• d4r9ga_ appears in SCOPe 2.07
  
• d4r9ga_ appears in the current release, SCOPe 2.08