Lineage for d4pygb2 (4pyg B:146-468)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2154577Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2154578Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2155058Family d.3.1.4: Transglutaminase core [54044] (3 protein domains)
  6. 2155064Protein Transglutaminase catalytic domain [54045] (4 species)
  7. 2155102Species Human (Homo sapiens), tissue isozyme [TaxId:9606] [75333] (4 PDB entries)
    GDP-binding protein
  8. 2155114Domain d4pygb2: 4pyg B:146-468 [308025]
    Other proteins in same PDB: d4pyga1, d4pyga3, d4pyga4, d4pyga5, d4pygb1, d4pygb3, d4pygb4, d4pygb5, d4pyge1, d4pyge3, d4pyge4, d4pyge5
    automated match to d3ly6a2
    complexed with gtp

Details for d4pygb2

PDB Entry: 4pyg (more details), 2.8 Å

PDB Description: Transglutaminase2 complexed with GTP
PDB Compounds: (B:) Protein-glutamine gamma-glutamyltransferase 2

SCOPe Domain Sequences for d4pygb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d4pygb2 d.3.1.4 (B:146-468) Transglutaminase catalytic domain {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}

SCOPe Domain Coordinates for d4pygb2:

Click to download the PDB-style file with coordinates for d4pygb2.
(The format of our PDB-style files is described here.)

Timeline for d4pygb2:

  • d4pygb2 is new in SCOPe 2.06-stable