Lineage for d4o4ub3 (4o4u B:300-390)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2078525Fold b.181: Handle domain of Transferrin binding protein TbpB-like [310564] (1 superfamily)
    2 layers; antiparallel B-sheet, order 1432 or 216543, flanked by alpha helix or 2-strand beta hairpin
  4. 2078526Superfamily b.181.1: Handle domain of Transferrin binding protein TbpB-like [310592] (2 families) (S)
    C-terminal part of Pfam PF01298
  5. 2078535Family b.181.1.0: automated matches [310674] (1 protein)
    not a true family
  6. 2078536Protein automated matches [310874] (2 species)
    not a true protein
  7. 2078546Species Haemophilus parasuis [TaxId:738] [311403] (2 PDB entries)
  8. 2078550Domain d4o4ub3: 4o4u B:300-390 [307822]
    Other proteins in same PDB: d4o4ua2, d4o4ua4, d4o4ub2, d4o4ub4, d4o4uc2, d4o4uc4, d4o4ud2, d4o4ud4
    automated match to d3hola4
    complexed with gol; mutant

Details for d4o4ub3

PDB Entry: 4o4u (more details), 2.64 Å

PDB Description: crystal structure of the vaccine antigen transferrin binding protein b (tbpb) mutant trp-176-ala from haemophilus parasuis hp5
PDB Compounds: (B:) TbpB

SCOPe Domain Sequences for d4o4ub3:

Sequence, based on SEQRES records: (download)

>d4o4ub3 b.181.1.0 (B:300-390) automated matches {Haemophilus parasuis [TaxId: 738]}

Sequence, based on observed residues (ATOM records): (download)

>d4o4ub3 b.181.1.0 (B:300-390) automated matches {Haemophilus parasuis [TaxId: 738]}

SCOPe Domain Coordinates for d4o4ub3:

Click to download the PDB-style file with coordinates for d4o4ub3.
(The format of our PDB-style files is described here.)

Timeline for d4o4ub3:

  • d4o4ub3 is new in SCOPe 2.06-stable