SCOPe 2.04: Domain d1dkdd_: 1dkd D:

Lineage for d1dkdd_ (1dkd D:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.8: The "swivelling" beta/beta/alpha domain [52008] (10 superfamilies)
   3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology
   this domain is thought to be mobile in most multi-domain proteins known to contain it

4. Superfamily c.8.5: GroEL apical domain-like [52029] (3 families)

5. Family c.8.5.1: GroEL-like chaperone, apical domain [52030] (2 proteins)

6. Protein GroEL, A domain [52031] (4 species)

7. Species Escherichia coli [TaxId:562] [52032] (18 PDB entries)

8. Domain d1dkdd_: 1dkd D: [30778]

Details for d1dkdd_

PDB Entry: 1dkd, 2.1 Å

PDB Description: crystal structure of a groel (apical domain) and a dodecameric peptide complex

PDB Compounds: (D:) groEL

SCOPe Domain Sequences for d1dkdd_:

Sequence; same for both SEQRES and ATOM records:

>d1dkdd_ c.8.5.1 (D:) GroEL, A domain {Escherichia coli [TaxId: 562]}
egmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleavakagkpllii
aedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtviseeigmele
katledlgqakrvvinkdtttiidgv

Timeline for d1dkdd_:

• d1dkdd_ first appeared (with stable ids) in SCOP 1.55
  
• d1dkdd_ appears in SCOPe 2.03
  
• d1dkdd_ appears in SCOPe 2.05
  
• d1dkdd_ appears in the current release, SCOPe 2.08