Class a: All alpha proteins [46456] (289 folds) |
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies) core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down |
Superfamily a.4.13: Sigma3 and sigma4 domains of RNA polymerase sigma factors [88659] (4 families) |
Family a.4.13.2: Sigma4 domain [88665] (5 proteins) |
Protein Sigma70 (SigA, RpoD) [88666] (4 species) Pfam PF03979 |
Species Escherichia coli [TaxId:562] [116816] (3 PDB entries) Uniprot P00579 546-613 |
Domain d4jk1x_: 4jk1 X: [307606] protein/DNA complex; complexed with g4p, zn |
PDB Entry: 4jk1 (more details), 3.9 Å
SCOPe Domain Sequences for d4jk1x_:
Sequence, based on SEQRES records: (download)
>d4jk1x_ a.4.13.2 (X:) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]} qsqlkllvtrgkeqgyltyaevndhlpedivdsdqiediiqmindmgiqvmeeapdaddl mlaentadedaaeaaaqvlssveseigrttdpvrmymremgtvelltregeidiakried ginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaeedlaptathvgsel sqedldddededeedgdddsadddnsidpelarekfaelraqyvvtrdtikakgrshata qeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitl ftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrm sigeakarrakkemveanlrlvisiakkytnrglqfldliqegniglmkavdkfeyrrgy kfstyatwwirqaitrsiadqartiripvhmietinklnrisrqmlqemgreptpeelae rmlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraath dvlagltareakvlrmrfgidmntdytleevgkqfdvtrerirqieakalrklrhpsrse vlrs
>d4jk1x_ a.4.13.2 (X:) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]} qsqlkllvtrgkeqgyltyaevndhlpedivdsdqiediiqmindmgiqvmeeapdaddt dpvrmymremgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveaei dpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvns mrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhd vseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlrlvisiak kytnrglqfldliqegniglmkavdkfeyrrgykfstyatwwirqaitrsiadqartiri pvhmietinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpig ddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdyt leevgkqfdvtrerirqieakalrklrhpsrsevlrs
Timeline for d4jk1x_: