Lineage for d4d6ja2 (4d6j A:839-1003)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2041816Fold b.24: Hyaluronate lyase-like, C-terminal domain [49862] (2 superfamilies)
    sandwich, 10 strands in 2 sheets; "folded meander"
  4. 2041873Superfamily b.24.2: Glycosyl hydrolase family 98 C-terminal domain-like [310597] (2 families) (S)
    C-terminal half of Pfam PF08307
    Slightly different topology from Hyaluronate lyase; contains helical insert
  5. 2041878Family b.24.2.0: automated matches [310667] (1 protein)
    not a true family
  6. 2041879Protein automated matches [310861] (2 species)
    not a true protein
  7. 2041883Species Streptococcus pneumoniae [TaxId:406556] [311249] (13 PDB entries)
  8. 2041896Domain d4d6ja2: 4d6j A:839-1003 [307231]
    Other proteins in same PDB: d4d6ja1, d4d6ja3
    automated match to d2wmfa2
    complexed with a2g, edo; mutant

Details for d4d6ja2

PDB Entry: 4d6j (more details), 1.98 Å

PDB Description: crystal structure of a family 98 glycoside hydrolase catalytic module (sp3gh98) in complex with the type 2 blood group a-tetrasaccharide (e558a x01 mutant)
PDB Compounds: (A:) glycoside hydrolase

SCOPe Domain Sequences for d4d6ja2:

Sequence; same for both SEQRES and ATOM records: (download)

>d4d6ja2 b.24.2.0 (A:839-1003) automated matches {Streptococcus pneumoniae [TaxId: 406556]}

SCOPe Domain Coordinates for d4d6ja2:

Click to download the PDB-style file with coordinates for d4d6ja2.
(The format of our PDB-style files is described here.)

Timeline for d4d6ja2:

  • d4d6ja2 is new in SCOPe 2.06-stable