Lineage for d4d6ja1 (4d6j A:421-838)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2113903Family c.37.1.0: automated matches [191323] (1 protein)
    not a true family
  6. 2113904Protein automated matches [190123] (116 species)
    not a true protein
  7. 2114720Species Streptococcus pneumoniae [TaxId:406556] [311248] (13 PDB entries)
  8. 2114733Domain d4d6ja1: 4d6j A:421-838 [307230]
    Other proteins in same PDB: d4d6ja2, d4d6ja3
    automated match to d2wmfa1
    complexed with a2g, edo; mutant

Details for d4d6ja1

PDB Entry: 4d6j (more details), 1.98 Å

PDB Description: crystal structure of a family 98 glycoside hydrolase catalytic module (sp3gh98) in complex with the type 2 blood group a-tetrasaccharide (e558a x01 mutant)
PDB Compounds: (A:) glycoside hydrolase

SCOPe Domain Sequences for d4d6ja1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4d6ja1 c.37.1.0 (A:421-838) automated matches {Streptococcus pneumoniae [TaxId: 406556]}

SCOPe Domain Coordinates for d4d6ja1:

Click to download the PDB-style file with coordinates for d4d6ja1.
(The format of our PDB-style files is described here.)

Timeline for d4d6ja1:

  • d4d6ja1 is new in SCOPe 2.06-stable