SCOPe 2.08: Domain d3u1ga1: 3u1g A:239-606

Lineage for d3u1ga1 (3u1g A:239-606)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families)

5. Family c.26.1.0: automated matches [191377] (1 protein)
   not a true family

6. Protein automated matches [190459] (61 species)
   not a true protein

7. Species Trypanosoma brucei [TaxId:999953] [226467] (29 PDB entries)

8. Domain d3u1ga1: 3u1g A:239-606 [306617]
   Other proteins in same PDB: d3u1ga2, d3u1gb4, d3u1gb5
   automated match to d4eg8b1
   protein/RNA complex; complexed with 415, dms, gol, met, so4

Details for d3u1ga1

PDB Entry: 3u1g, 2.35 Å

PDB Description: Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor Chem 1415

PDB Compounds: (A:) Methionyl-tRNA synthetase

SCOPe Domain Sequences for d3u1ga1:

Sequence, based on SEQRES records:

>d3u1ga1 c.26.1.0 (A:239-606) automated matches {Trypanosoma brucei [TaxId: 999953]}
ekvffvtspiyyvnaaphighvystlitdvigryhrvkgervfaltgtdehgqkvaeaak
qkqvspydfttavagefkkcfeqmdysidyfirttneqhkavvkelwtkleqkgdiylgr
yegwysisdesfltpqnitdgvdkdgnpckvslesghvvtwvseenymfrlsafrerlle
wyhanpgcivpefrrreviravekglpdlsvsraratlhnwaipvpgnpdhcvyvwldal
tnyltgsrlrvdesgkevslvddfnelerfpadvhvigkdilkfhaiywpafllsaglpl
pkkivahgwwtkdrkkiskslgnvfdpvekaeefgydalkyfllresgfsddgdysdknm
iarlngel

Sequence, based on observed residues (ATOM records):

>d3u1ga1 c.26.1.0 (A:239-606) automated matches {Trypanosoma brucei [TaxId: 999953]}
ekvffvtspiyyvnaaphighvystlitdvigryhrvkgervfaltgtdehgqkvaeaak
qkqvspydfttavagefkkcfeqmdysidyfirttneqhkavvkelwtkleqkgdiylgr
yegwysisdesfltpqnitdgvdkdgnpckvslesghvvtwvseenymfrlsafrerlle
wyhanpgcivpefrrreviravekglpdlsvsraratlhnwaipvpgnpdhcvyvwldal
tnyltgsrlrvdesgkevslvddfnelerfpadvhvigkdilkfhaiywpafllsaglpl
pkkivahgwwtkdrkkilgnvfdpvekaeefgydalkyfllresgfsddgdysdknmiar
lngel

Timeline for d3u1ga1:

• d3u1ga1 first appeared in SCOPe 2.06
  
• d3u1ga1 appears in SCOPe 2.07