SCOPe 2.06: Domain d3qlta_: 3qlt A:

Lineage for d3qlta_ (3qlt A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   parallel beta-sheet of 6 strands, order 213456

4. Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families)
   Similar in architecture to the superfamily II but partly differs in topology

5. Family c.93.1.0: automated matches [191439] (1 protein)
   not a true family

6. Protein automated matches [190646] (70 species)
   not a true protein

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [311293] (5 PDB entries)

8. Domain d3qlta_: 3qlt A: [306385]
   automated match to d3sajd_
   complexed with nag

Details for d3qlta_

PDB Entry: 3qlt, 2.99 Å

PDB Description: crystal structure of a gluk2 (glur6) glycan wedge homodimer assembly

PDB Compounds: (A:) Glutamate receptor, ionotropic kainate 2

SCOPe Domain Sequences for d3qlta_:

Sequence, based on SEQRES records:

>d3qlta_ c.93.1.0 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
vlrfggifeyvesgpmgaeelafrfavntinrnrtllpnttltydtqkinlydsfeaskk
acdqlslgvaaifgpshsssanavqsicnalgvphiqtrwkhqvsdnkdsfyvslypdfs
slsraildlvqffkwktvtvvyddstglirlqelikapsrynlrlkirqlpadtkdakpl
lkemkrgkefhvifdcshemaagilkqalnmsmmteyyhyifttldlfaldvepyrysgv
nmtgfrilntentqvssiiekwsmerlqappkpdsglldgfmttdaalmydavhvvsvav
qqfpqmtvsslqcnrhkpwrfgtrfmslikeahwegltgritfnktnglrtdfdldvisl
keeglekigtwdpasglnmte

Sequence, based on observed residues (ATOM records):

>d3qlta_ c.93.1.0 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
vlrfggifeyvpmgaeelafrfavntinrnrtllpnttltydtqkinlydsfeaskkacd
qlslgvaaifgpshsssanavqsicnalgvphiqtrwkhqvsdnkdsfyvslypdfssls
raildlvqffkwktvtvvyddstglirlqelikapsrynlrlkirqlpadtkdakpllke
mkrgkefhvifdcshemaagilkqalnmsmmteyyhyifttldlfaldvepyrysgvnmt
gfrilntentqvssiiekwsmepdsglldgfmttdaalmydavhvvsvavqqfpqmtvss
lqcnrhkpwrfgtrfmslikeahwegltgritfnktnglrtdfdldvislkeeglekigt
wdpasglnmte

Timeline for d3qlta_:

• d3qlta_ is new in SCOPe 2.06-stable
  
• d3qlta_ appears in SCOPe 2.07
  
• d3qlta_ appears in the current release, SCOPe 2.08