Lineage for d3ppfa1 (3ppf A:1-403)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2089841Superfamily c.1.22: UROD/MetE-like [51726] (3 families) (S)
  5. 2089888Family c.1.22.0: automated matches [191464] (1 protein)
    not a true family
  6. 2089889Protein automated matches [190717] (5 species)
    not a true protein
  7. 2089916Species Yeast (Candida albicans) [TaxId:5476] [267869] (5 PDB entries)
  8. 2089923Domain d3ppfa1: 3ppf A:1-403 [306256]
    automated match to d4qqua1

Details for d3ppfa1

PDB Entry: 3ppf (more details), 2.3 Å

PDB Description: crystal structure of the candida albicans methionine synthase by surface entropy reduction, alanine variant without zinc
PDB Compounds: (A:) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase

SCOPe Domain Sequences for d3ppfa1:

Sequence, based on SEQRES records: (download)

>d3ppfa1 c.1.22.0 (A:1-403) automated matches {Yeast (Candida albicans) [TaxId: 5476]}
mvqssvlgfpriggqrelkkiteaywsgkatveellakgkelrehnwklqqkagvdiips
ndfsyydqvldlsllfnaiperytkfdlapidvlfamgrglqaaatatqaavdvtalemv
kwfdsnyhyvrptfshstefklntaagikpvdefneakalgvqtrpvilgpvsylylgka
dkdsldlepisllpkilpvykellqklkeagaeqvqidepvlvldlpeavqskfkeayda
lvgadvpelilttyfgdvrpnlkaienlpvagfhfdfvrvpeqldevasilkdgqtlsag
vvdgrniwktdfakasavvqkaiekvgkdkvvvatsssllhtpvdlesetkldavikdwf
sfatqkldevvviaknvsgedvskqleanaasikarsessitn

Sequence, based on observed residues (ATOM records): (download)

>d3ppfa1 c.1.22.0 (A:1-403) automated matches {Yeast (Candida albicans) [TaxId: 5476]}
mvqssvlgfpriggqrelkkiteaywsgkatveellakgkelrehnwklqqkagvdiips
ndfsyydqvldlsllfnaiperytkfdlapidvlfamgrglqaaaaavdvtalemvkwfd
snyhyvrptfshstefklntaagikpvdefneakalgvqtrpvilgpvsylylgkadkds
ldlepisllpkilpvykellqklkeagaeqvqidepvlvldlpeavqskfkeaydalvga
dvpelilttyfgdvrpnlkaienlpvagfhfdfvrvpeqldevasilkdgqtlsagvvdg
rniwktdfakasavvqkaiekvgkdkvvvatsssllhtpvdlesetkldavikdwfsfat
qkldevvviaknvsgedvskqleanaasikarsessitn

SCOPe Domain Coordinates for d3ppfa1:

Click to download the PDB-style file with coordinates for d3ppfa1.
(The format of our PDB-style files is described here.)

Timeline for d3ppfa1:

  • d3ppfa1 is new in SCOPe 2.06-stable

View in 3D
Domains from same chain:
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d3ppfa2