SCOPe 2.06: Domain d3ppca1: 3ppc A:1-403

Lineage for d3ppca1 (3ppc A:1-403)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.22: UROD/MetE-like [51726] (3 families)

5. Family c.1.22.0: automated matches [191464] (1 protein)
   not a true family

6. Protein automated matches [190717] (5 species)
   not a true protein

7. Species Yeast (Candida albicans) [TaxId:5476] [267869] (5 PDB entries)

8. Domain d3ppca1: 3ppc A:1-403 [306250]
   Other proteins in same PDB: d3ppca3, d3ppcb3
   automated match to d4qqua1
   complexed with cl, zn

Details for d3ppca1

PDB Entry: 3ppc, 2.2 Å

PDB Description: Crystal structure of the Candida albicans methionine synthase by surface entropy reduction, tyrosine variant with zinc

PDB Compounds: (A:) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase

SCOPe Domain Sequences for d3ppca1:

Sequence, based on SEQRES records:

>d3ppca1 c.1.22.0 (A:1-403) automated matches {Yeast (Candida albicans) [TaxId: 5476]}
mvqssvlgfpriggqrelkkiteaywsgkatveellakgkelrehnwklqqkagvdiips
ndfsyydqvldlsllfnaiperytkfdlapidvlfamgrglqyyatytqaavdvtalemv
kwfdsnyhyvrptfshstefklntaagikpvdefneakalgvqtrpvilgpvsylylgka
dkdsldlepisllpkilpvykellqklkeagaeqvqidepvlvldlpeavqskfkeayda
lvgadvpelilttyfgdvrpnlkaienlpvagfhfdfvrvpeqldevasilkdgqtlsag
vvdgrniwktdfakasavvqkaiekvgkdkvvvatsssllhtpvdlesetkldavikdwf
sfatqkldevvviaknvsgedvskqleanaasikarsessitn

Sequence, based on observed residues (ATOM records):

>d3ppca1 c.1.22.0 (A:1-403) automated matches {Yeast (Candida albicans) [TaxId: 5476]}
mvqssvlgfpriggqrelkkiteaywsgkatveellakgkelrehnwklqqkagvdiips
ndfsyydqvldlsllfnaiperytkfdlapidvlfamgrglqyyattalemvkwfdsnyh
yvrptfshstefklntaagikpvdefneakalgvqtrpvilgpvsylylgkadkdsldle
pisllpkilpvykellqklkeagaeqvqidepvlvldlpeavqskfkeaydalvgadvpe
lilttyfgdvrpnlkaienlpvagfhfdfvrvpeqldevasilkdgqtlsagvvdgrniw
ktdfakasavvqkaiekvgkdkvvvatsssllhtpvdlesetkldavikdwfsfatqkld
evvviaknvsgedvskqleanaasikarsessitn

Timeline for d3ppca1:

• d3ppca1 is new in SCOPe 2.06-stable
  
• d3ppca1 appears in SCOPe 2.07
  
• d3ppca1 appears in the current release, SCOPe 2.08