Lineage for d3nnpb_ (3nnp B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2130990Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2130991Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2132229Family c.67.1.0: automated matches [191328] (1 protein)
    not a true family
  6. 2132230Protein automated matches [190151] (121 species)
    not a true protein
  7. 2133020Species Xanthomonas oryzae [TaxId:291331] [189393] (6 PDB entries)
  8. 2133040Domain d3nnpb_: 3nnp B: [306055]
    automated match to d1ukja_
    complexed with bct, gol, plp

Details for d3nnpb_

PDB Entry: 3nnp (more details), 2.29 Å

PDB Description: Native structure of XometC, a cystathionine c-lyase protein from Xanthomonas oryzae pv.oryzae, at pH 5.2
PDB Compounds: (B:) Cystathionine gamma-lyase-like protein

SCOPe Domain Sequences for d3nnpb_:

Sequence, based on SEQRES records: (download)

>d3nnpb_ c.67.1.0 (B:) automated matches {Xanthomonas oryzae [TaxId: 291331]}
lslatlaihggqspdpstgavmppiyatstyaqsspgehqgfeysrthnptrfayercva
aleggtrafafasgmaatstvmelldagshvvamddlyggtfrlfervrrrtagldfsfv
dltdpaafkaairadtkmvwietptnpmlklvdiaaiaviarkhglltvvdntfaspmlq
rplslgadlvvhsatkylnghsdmvggiavvgdnaelaeqmaflqnsiggvqgpfdsfla
lrglktlplrmrahcenalalaqwlethpaiekviypglashpqhvlakrqmsgfggivs
ivlkggfdaakrfcektelftlaeslggveslvnhpavmthasipvarreqlgisdalvr
lsvgiedlgdlrgdleralv

Sequence, based on observed residues (ATOM records): (download)

>d3nnpb_ c.67.1.0 (B:) automated matches {Xanthomonas oryzae [TaxId: 291331]}
lslatlaihggqspdpstgavmppiyatstyaqsspsrthnptrfayercvaaleggtra
fafasgmaatstvmelldagshvvamddlyggtfrlfervrrrtagldfsfvdltdpaaf
kaairadtkmvwietptnpmlklvdiaaiaviarkhglltvvdntfaspmlqrplslgad
lvvhsatkylnghsdmvggiavvgdnaelaeqmaflqnsiggvqgpfdsflalrglktlp
lrmrahcenalalaqwlethpaiekviypglashpqhvlakrqmsgfggivsivlkggfd
aakrfcektelftlaeslggveslvnhpavmthasipvarreqlgisdalvrlsvgiedl
gdlrgdleralv

SCOPe Domain Coordinates for d3nnpb_:

Click to download the PDB-style file with coordinates for d3nnpb_.
(The format of our PDB-style files is described here.)

Timeline for d3nnpb_:

  • d3nnpb_ is new in SCOPe 2.06-stable