Lineage for d3ms5a2 (3ms5 A:96-384)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2403751Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2404605Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. 2404719Family b.82.2.5: TauD/TfdA-like [75038] (5 protein domains)
    automatically mapped to Pfam PF02668
  6. 2404720Protein Gamma-butyrobetaine dioxygenase (BBOX1) catalytic domain [310813] (1 species)
  7. 2404721Species Human (Homo sapiens) [TaxId:9606] [311079] (4 PDB entries)
  8. 2404723Domain d3ms5a2: 3ms5 A:96-384 [305977]
    Other proteins in same PDB: d3ms5a1, d3ms5a3
    complexed with edo, ni, oga, ree, zn

Details for d3ms5a2

PDB Entry: 3ms5 (more details), 1.82 Å

PDB Description: crystal structure of human gamma-butyrobetaine,2-oxoglutarate dioxygenase 1 (bbox1)
PDB Compounds: (A:) Gamma-butyrobetaine dioxygenase

SCOPe Domain Sequences for d3ms5a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d3ms5a2 b.82.2.5 (A:96-384) Gamma-butyrobetaine dioxygenase (BBOX1) catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d3ms5a2:

Click to download the PDB-style file with coordinates for d3ms5a2.
(The format of our PDB-style files is described here.)

Timeline for d3ms5a2: