Lineage for d3lyja_ (3lyj A:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2040266Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2040267Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2040314Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 protein domains)
  6. 2040315Protein Hemagglutinin [49824] (9 species)
    includes rudiment esterase domain
  7. 2040355Species Influenza A virus, different strains [TaxId:11320] [49825] (116 PDB entries)
  8. 2040595Domain d3lyja_: 3lyj A: [305893]
    Other proteins in same PDB: d3lyjb_, d3lyjd_, d3lyjf_, d3lyjh_, d3lyjj_, d3lyjl_
    automated match to d3gbna_
    complexed with nag

Details for d3lyja_

PDB Entry: 3lyj (more details), 2.87 Å

PDB Description: Crystal structure of the hemagglutinin of 2009 H1N1 influenza virus
PDB Compounds: (A:) Hemagglutinin

SCOPe Domain Sequences for d3lyja_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3lyja_ b.19.1.2 (A:) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
dtlcigyhannstdtvdtvleknvtvthsvnlledkhngklcklrgvaplhlgkcniagw
ilgnpeceslstasswsyivetpssdngtcypgdfidyeelreqlssvssferfeifpkt
sswpnhdsnkgvtaacphagaksfyknliwlvkkgnsypklsksyindkgkevlvlwgih
hpstsadqqslyqnadtyvfvgssryskkfkpeiairpkvrdqegrmnyywtlvepgdki
tfeatgnlvvpryafamernagsgiiisdtpvhdcnttcqtpkgaintslpfqnihpiti
gkcpkyvkstklrlatglrni

SCOPe Domain Coordinates for d3lyja_:

Click to download the PDB-style file with coordinates for d3lyja_.
(The format of our PDB-style files is described here.)

Timeline for d3lyja_:

  • d3lyja_ is new in SCOPe 2.06-stable