SCOPe 2.07: Domain d3kuka_: 3kuk A:

Lineage for d3kuka_ (3kuk A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
   core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

4. Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families)
   complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8

5. Family c.56.2.0: automated matches [191488] (1 protein)
   not a true family

6. Protein automated matches [190781] (45 species)
   not a true protein

7. Species Cow (Bos taurus) [TaxId:9913] [311305] (4 PDB entries)

8. Domain d3kuka_: 3kuk A: [305738]
   automated match to d2xrfa_
   complexed with dur, so4

Details for d3kuka_

PDB Entry: 3kuk, 2.78 Å

PDB Description: Trapping of an oxocarbenium ion intermediate in UP crystals

PDB Compounds: (A:) Uridine phosphorylase

SCOPe Domain Sequences for d3kuka_:

Sequence, based on SEQRES records:

>d3kuka_ c.56.2.0 (A:) automated matches {Cow (Bos taurus) [TaxId: 9913]}
dlvqlcnphiaamkedilyhfslststhdfpamfgdvkfvcvggspsrmkafikyvamel
gfahpgadypnicegtdryamfkvgpvlsvshgmgvpsiaimlhelikllyhahcsgvtl
irigtsggiglepgsvvitrqavdpcfkpefeqivlgkrevrntdldeqlvqelarcsae
lgefptvvgntmctldfyegqgrldgalcsytekdkqdylraayaagirniemeasvfaa
mcnacglraavvcvtllnrlegdqissphdvlaeyqqrpqrlvgqfikkrlmq

Sequence, based on observed residues (ATOM records):

>d3kuka_ c.56.2.0 (A:) automated matches {Cow (Bos taurus) [TaxId: 9913]}
dlvqlcnphiaamkedilyhfslststhdfpamfgdvkfvcvggspsrmkafikyvamel
gfaadypnicegtdryamfkvgpvlsvshgmgvpsiaimlhelikllyhahcsgvtliri
gtsggiglepgsvvitrqavdpcfkpefeqivlgkrevrntdldeqlvqelarcsaelge
fptvvgntmctldfyegqgrldgalcsytekdkqdylraayaagirniemeasvfaamcn
acglraavvcvtllnrlegdqissphdvlaeyqqrpqrlvgqfikkrlmq

Timeline for d3kuka_:

• d3kuka_ first appeared in SCOPe 2.06
  
• d3kuka_ appears in the current release, SCOPe 2.08