Lineage for d3a5co_ (3a5c O:)

  1. Root: SCOPe 2.06
  2. 2265466Class h: Coiled coil proteins [57942] (7 folds)
  3. 2268037Fold h.4: Antiparallel coiled-coil [58086] (19 superfamilies)
    this is not a true fold; contains at least two very long antiparallel helices
  4. 2268203Superfamily h.4.20: V-type ATPase central rotor subunit D [310580] (2 families) (S)
    Role similar to F1 ATP synthase gamma (c.49.2), but do not appear to be homologous
    Has 2 antiparallel beta strands in addition to coiled coils; see PubMed 25971514
  5. 2268204Family h.4.20.1: V1 ATP synthase D subunit [310620] (1 protein)
  6. 2268205Protein V1 ATP synthase D subunit [310713] (2 species)
  7. 2268208Species Thermus thermophilus HB8 [TaxId:300852] [310952] (1 PDB entry)
  8. 2268210Domain d3a5co_: 3a5c O: [304912]
    Other proteins in same PDB: d3a5ca1, d3a5ca2, d3a5ca3, d3a5ca4, d3a5cb1, d3a5cb2, d3a5cb3, d3a5cb4, d3a5cc1, d3a5cc2, d3a5cc3, d3a5cc4, d3a5cd1, d3a5cd2, d3a5cd3, d3a5ce1, d3a5ce2, d3a5ce3, d3a5cf1, d3a5cf2, d3a5cf3, d3a5ch_, d3a5ci1, d3a5ci2, d3a5ci3, d3a5ci4, d3a5cj1, d3a5cj2, d3a5cj3, d3a5cj4, d3a5ck1, d3a5ck2, d3a5ck3, d3a5ck4, d3a5cl1, d3a5cl2, d3a5cl3, d3a5cm1, d3a5cm2, d3a5cm3, d3a5cn1, d3a5cn2, d3a5cn3, d3a5cp_
    complexed with adp

Details for d3a5co_

PDB Entry: 3a5c (more details), 4.51 Å

PDB Description: Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase
PDB Compounds: (O:) V-type ATP synthase subunit D

SCOPe Domain Sequences for d3a5co_:

Sequence, based on SEQRES records: (download)

>d3a5co_ h.4.20.1 (O:) V1 ATP synthase D subunit {Thermus thermophilus HB8 [TaxId: 300852]}
msqvsptrmnllqrrgqlrlaqkgvdllkkkrdalvaeffglvreamearkaldqaakea
yaalllaqafdgpevvagaalgvpplegveaevenvwgskvprlkatfpdgallspvgtp
aytleasrafrryaealirvantetrlkkigeeikkttrrvnaleqvvipgiraqirfiq
qvleqreredtfrlkrikgkieare

Sequence, based on observed residues (ATOM records): (download)

>d3a5co_ h.4.20.1 (O:) V1 ATP synthase D subunit {Thermus thermophilus HB8 [TaxId: 300852]}
msqvsptrmnllqrrgqlrlaqkgvdllkkkrdalvaeffglvreamearkaldqryaea
lirvantetrlkkigeeikkttrrvnaleqvvipgiraqirfiqqvleqreredtfrlkr
ikgkieare

SCOPe Domain Coordinates for d3a5co_:

Click to download the PDB-style file with coordinates for d3a5co_.
(The format of our PDB-style files is described here.)

Timeline for d3a5co_:

View in 3D
Domains from other chains:
(mouse over for more information)
d3a5ca1, d3a5ca2, d3a5ca3, d3a5ca4, d3a5cb1, d3a5cb2, d3a5cb3, d3a5cb4, d3a5cc1, d3a5cc2, d3a5cc3, d3a5cc4, d3a5cd1, d3a5cd2, d3a5cd3, d3a5ce1, d3a5ce2, d3a5ce3, d3a5cf1, d3a5cf2, d3a5cf3, d3a5cg_, d3a5ch_, d3a5ci1, d3a5ci2, d3a5ci3, d3a5ci4, d3a5cj1, d3a5cj2, d3a5cj3, d3a5cj4, d3a5ck1, d3a5ck2, d3a5ck3, d3a5ck4, d3a5cl1, d3a5cl2, d3a5cl3, d3a5cm1, d3a5cm2, d3a5cm3, d3a5cn1, d3a5cn2, d3a5cn3, d3a5cp_