Lineage for d2rkwa1 (2rkw A:76-350)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2113903Family c.37.1.0: automated matches [191323] (1 protein)
    not a true family
  6. 2113904Protein automated matches [190123] (130 species)
    not a true protein
  7. 2114472Species Methanosarcina mazei [TaxId:2209] [311242] (3 PDB entries)
  8. 2114477Domain d2rkwa1: 2rkw A:76-350 [304463]
    Other proteins in same PDB: d2rkwa2, d2rkwb1, d2rkwb3
    automated match to d3j9tb2
    mutant

Details for d2rkwa1

PDB Entry: 2rkw (more details), 2.81 Å

PDB Description: intermediate position of atp on its trail to the binding pocket inside the subunit b mutant r416w of the energy converter a1ao atp synthase
PDB Compounds: (A:) V-type ATP synthase beta chain

SCOPe Domain Sequences for d2rkwa1:

Sequence, based on SEQRES records: (download)

>d2rkwa1 c.37.1.0 (A:76-350) automated matches {Methanosarcina mazei [TaxId: 2209]}
lklpasvdllgrilsgsgeprdggprivpdqlldingaamnpyarlppkdfiqtgistid
gtntlvrgqklpifsasglphneialqiarqasvpgsesafavvfaamgitneeaqyfms
dfektgaleravvflnladdpaverivtprmaltaaeylayehgmhvlviltditnyaea
lrqmgaarnevpgrrgypgymytdlatlyeragivkgakgsvtqipilsmpgddithpip
dlsgyitegqivvarelhrkgiyppinvlpslsrl

Sequence, based on observed residues (ATOM records): (download)

>d2rkwa1 c.37.1.0 (A:76-350) automated matches {Methanosarcina mazei [TaxId: 2209]}
lklpasvdllgrilsgsgeprdggprivpdqlldingaamnpyarlppkdfiqtgistid
gtntlvrgqklpifsasglphneialqiarqasvpgsesafavvfaamgitneeaqyfms
dfektgaleravvflnladdpaverivtprmaltaaeylayehgmhvlviltditnyaea
lrqmgypgymytdlatlyeragivkgakgsvtqipilsmpgddithpipdlsgyitegqi
vvarelhrkgiyppinvlpslsrl

SCOPe Domain Coordinates for d2rkwa1:

Click to download the PDB-style file with coordinates for d2rkwa1.
(The format of our PDB-style files is described here.)

Timeline for d2rkwa1:

  • d2rkwa1 is new in SCOPe 2.06-stable